BLASTX nr result

ID: Dioscorea21_contig00030629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030629
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17867.3| unnamed protein product [Vitis vinifera]              145   1e-32
ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|33265...   142   9e-32
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]                142   9e-32
ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana] gi|25951776...   142   9e-32
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab...   140   3e-31

>emb|CBI17867.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  145 bits (366), Expect = 1e-32
 Identities = 76/138 (55%), Positives = 90/138 (65%), Gaps = 4/138 (2%)
 Frame = +1

Query: 118 NLWSDLIDNPQHWQDYRINKLN----PKFPDFKHKDTRESLWLNTAPAEVLPKLDGLQFA 285
           +LW DLI NP+ W+D R +KLN    PKFPDFK KD    LWL++AP  V  KL+GL+F 
Sbjct: 68  SLWRDLIMNPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLDSAPEWVSSKLEGLEF- 126

Query: 286 EGNSTTKTAKILSVNEKENLWKDLVENPKNWWDNRSDKLKSSQPDFKHKVTGQVLWLDSS 465
             N T KT K L  N  +  WK+LVENP  WWDNRS K K   PDFKHK TG+ LWL SS
Sbjct: 127 -DNQTHKT-KYLKRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFKHKDTGEALWLSSS 184

Query: 466 TTPSWVLADLPPPSSKSN 519
             P+WVL+ LPP  +  N
Sbjct: 185 --PAWVLSKLPPIKAGKN 200



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 31/67 (46%), Positives = 44/67 (65%)
 Frame = +1

Query: 124 WSDLIDNPQHWQDYRINKLNPKFPDFKHKDTRESLWLNTAPAEVLPKLDGLQFAEGNSTT 303
           W +L++NP  W D R +K   K PDFKHKDT E+LWL+++PA VL KL  ++  +  + T
Sbjct: 145 WKNLVENPDKWWDNRSSKTKEKAPDFKHKDTGEALWLSSSPAWVLSKLPPIKAGKNVTFT 204

Query: 304 KTAKILS 324
           K   +LS
Sbjct: 205 KRETLLS 211


>ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|332658861|gb|AEE84261.1|
           protein OSB2 [Arabidopsis thaliana]
          Length = 371

 Score =  142 bits (358), Expect = 9e-32
 Identities = 69/134 (51%), Positives = 88/134 (65%), Gaps = 4/134 (2%)
 Frame = +1

Query: 124 WSDLIDNPQHWQDYRINKLN----PKFPDFKHKDTRESLWLNTAPAEVLPKLDGLQFAEG 291
           W+ LI+NP+ W D+R NK+N    P+ PDFK KD+  SLWLN AP  VLPKL+GL+F   
Sbjct: 237 WNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEF--- 293

Query: 292 NSTTKTAKILSVNEKENLWKDLVENPKNWWDNRSDKLKSSQPDFKHKVTGQVLWLDSSTT 471
           +     A+++   + E  WKDLV+NP  WWDNR DK  +  PDFKHK TG+ LWL+ S  
Sbjct: 294 DVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-- 351

Query: 472 PSWVLADLPPPSSK 513
           P+WVL  LPP   K
Sbjct: 352 PTWVLPKLPPVKKK 365



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +1

Query: 325 VNEKENLWKDLVENPKNWWDNRSDK----LKSSQPDFKHKVTGQVLWLDSSTTPSWVLAD 492
           ++E  + W  L+ENPK WWD+R +K    +K   PDFK K +   LWL+ +  P+WVL  
Sbjct: 230 IDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPK 287

Query: 493 L 495
           L
Sbjct: 288 L 288


>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
          Length = 371

 Score =  142 bits (358), Expect = 9e-32
 Identities = 69/134 (51%), Positives = 88/134 (65%), Gaps = 4/134 (2%)
 Frame = +1

Query: 124 WSDLIDNPQHWQDYRINKLN----PKFPDFKHKDTRESLWLNTAPAEVLPKLDGLQFAEG 291
           W+ LI+NP+ W D+R NK+N    P+ PDFK KD+  SLWLN AP  VLPKL+GL+F   
Sbjct: 237 WNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEF--- 293

Query: 292 NSTTKTAKILSVNEKENLWKDLVENPKNWWDNRSDKLKSSQPDFKHKVTGQVLWLDSSTT 471
           +     A+++   + E  WKDLV+NP  WWDNR DK  +  PDFKHK TG+ LWL+ S  
Sbjct: 294 DVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-- 351

Query: 472 PSWVLADLPPPSSK 513
           P+WVL  LPP   K
Sbjct: 352 PTWVLPKLPPVKKK 365



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +1

Query: 325 VNEKENLWKDLVENPKNWWDNRSDK----LKSSQPDFKHKVTGQVLWLDSSTTPSWVLAD 492
           ++E  + W  L+ENPK WWD+R +K    +K   PDFK K +   LWL+ +  P+WVL  
Sbjct: 230 IDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPK 287

Query: 493 L 495
           L
Sbjct: 288 L 288


>ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana]
           gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName:
           Full=Protein OSB2, chloroplastic; AltName:
           Full=Organellar single-stranded DNA-binding protein 2;
           AltName: Full=Protein FLORAL ABSCISSION ASSOCIATED;
           AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE
           9; Flags: Precursor gi|2827655|emb|CAA16609.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7268796|emb|CAB79001.1| hypothetical protein
           [Arabidopsis thaliana] gi|111074390|gb|ABH04568.1|
           At4g20010 [Arabidopsis thaliana]
           gi|332658860|gb|AEE84260.1| protein OSB2 [Arabidopsis
           thaliana]
          Length = 371

 Score =  142 bits (358), Expect = 9e-32
 Identities = 69/134 (51%), Positives = 88/134 (65%), Gaps = 4/134 (2%)
 Frame = +1

Query: 124 WSDLIDNPQHWQDYRINKLN----PKFPDFKHKDTRESLWLNTAPAEVLPKLDGLQFAEG 291
           W+ LI+NP+ W D+R NK+N    P+ PDFK KD+  SLWLN AP  VLPKL+GL+F   
Sbjct: 237 WNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEF--- 293

Query: 292 NSTTKTAKILSVNEKENLWKDLVENPKNWWDNRSDKLKSSQPDFKHKVTGQVLWLDSSTT 471
           +     A+++   + E  WKDLV+NP  WWDNR DK  +  PDFKHK TG+ LWL+ S  
Sbjct: 294 DVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-- 351

Query: 472 PSWVLADLPPPSSK 513
           P+WVL  LPP   K
Sbjct: 352 PTWVLPKLPPVKKK 365



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +1

Query: 325 VNEKENLWKDLVENPKNWWDNRSDK----LKSSQPDFKHKVTGQVLWLDSSTTPSWVLAD 492
           ++E  + W  L+ENPK WWD+R +K    +K   PDFK K +   LWL+ +  P+WVL  
Sbjct: 230 IDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPK 287

Query: 493 L 495
           L
Sbjct: 288 L 288


>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
           lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
           ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  140 bits (353), Expect = 3e-31
 Identities = 68/134 (50%), Positives = 87/134 (64%), Gaps = 4/134 (2%)
 Frame = +1

Query: 124 WSDLIDNPQHWQDYRINKLN----PKFPDFKHKDTRESLWLNTAPAEVLPKLDGLQFAEG 291
           W+ LI+NP+ W D+R NK+N    P+ PDFK KD+  SLWLN AP  VLPKL+GL+F   
Sbjct: 232 WNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKAPNWVLPKLEGLKF--- 288

Query: 292 NSTTKTAKILSVNEKENLWKDLVENPKNWWDNRSDKLKSSQPDFKHKVTGQVLWLDSSTT 471
           +      +++   + E  WKDLV+NP  WWDNR DK  +  PDFKHK TG+ LWL+ S  
Sbjct: 289 DVLVPKGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-- 346

Query: 472 PSWVLADLPPPSSK 513
           P+WVL  LPP   K
Sbjct: 347 PTWVLPKLPPVKKK 360



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
 Frame = +1

Query: 313 KILSVNEKENLWKDLVENPKNWWDNRSDK----LKSSQPDFKHKVTGQVLWLDSSTTPSW 480
           K + ++E  + W  L+ENPK WWD+R +K    +K   PDFK K +   LWL+ +  P+W
Sbjct: 221 KDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKA--PNW 278

Query: 481 VLADL 495
           VL  L
Sbjct: 279 VLPKL 283


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