BLASTX nr result

ID: Dioscorea21_contig00030618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030618
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531252.1| conserved hypothetical protein [Ricinus comm...    84   3e-14
ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]    60   3e-07
ref|XP_002447949.1| hypothetical protein SORBIDRAFT_06g018650 [S...    59   1e-06

>ref|XP_002531252.1| conserved hypothetical protein [Ricinus communis]
           gi|223529137|gb|EEF31116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
 Frame = -2

Query: 576 SHSLHCQLNILNLKNLDSLHHLHGQLFIRCYIPIASNKRFRIETQQLPFHTXXXXXXXXX 397
           + SL C+++I+  KNL+   H  G LF+R Y+    NKR +I TQ++   +         
Sbjct: 5   TQSLSCEISIVQAKNLELKSH--GNLFVRYYLSSGHNKRIQINTQEISSKSDLFWNEFFS 62

Query: 396 XXXXXXXK-------HNIIFELRLRNPKSMFKFVSKSKLLGKAEISWMDVLHANEKSMEK 238
                           +++FELR RN KS+   +  S+LLG+A+I W  VL + +  +EK
Sbjct: 63  LECLGTQDSINNLKQESVVFELRWRNTKSILGKIGGSQLLGRAKIPWKTVLESPKMEIEK 122

Query: 237 CISFIMFHRLSM---DIKPPSLMVKM-----EALVTGKTTEMINGGHECDCEACQWIG-- 88
            +  +     S+   D+KPPS+ + +     E +   K    +      DC  C+  G  
Sbjct: 123 WVMMVSKKNCSVLADDVKPPSVQIALRVRVPEMVAMEKRNGKLRKWENDDCGCCKDSGCR 182

Query: 87  CEEDVFLAATAAFDAV 40
           C++    A+ AAF+A+
Sbjct: 183 CQDYEIFASVAAFEAL 198


>ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|222853469|gb|EEE91016.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
 Frame = -2

Query: 567 LHCQLNILNLKNLDSLHHLHGQLFIRCYIPIASNKRFRIETQQLPF-------HTXXXXX 409
           L C++ IL  KN++     HG LF+R Y+   ++KR ++ ++++          +     
Sbjct: 4   LSCEIEILQAKNVE--FKSHGSLFVRYYLSTGNSKRIQLNSREISAKANLFWNESFSLEC 61

Query: 408 XXXXXXXXXXXKHNIIFELRLRNPKSMFKFVSKSKLLGKAEISWMDVLHANEKSMEKCIS 229
                      +  ++FELR R+   +   +  S+LLG+AE+ W  V+ + +  ME+ ++
Sbjct: 62  SGTEDSINNLKQQTVVFELRWRSTNPILGKIGGSQLLGRAEVPWKTVVESPKLEMERWVT 121

Query: 228 FI-MFHRLSMDIKPPSLMVKMEALVTG--------KTTEMINGGHECDCEACQWIGC--- 85
            I     +  D+KPP++ + M   V          +    +    EC C  C+  GC   
Sbjct: 122 MIPKKGSVPDDVKPPAVQIAMRVRVPAMAEMQEKKRRNGRLKRWDECGC--CKDSGCRCE 179

Query: 84  EEDVFLAATA 55
           + D+F+   A
Sbjct: 180 DYDIFVLVAA 189


>ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|222856538|gb|EEE94085.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
 Frame = -2

Query: 576 SHSLHCQLNILNLKNLDSLHHLHGQLFIRCYIPIASNKRFRIETQQLPF-------HTXX 418
           S  L  ++ I   KN++   H  G LF+R Y+    NKR +++++++          +  
Sbjct: 10  STCLGIEIEIFQAKNIEVKSH--GSLFVRYYLSAGKNKRIQLKSREISSKSNLFWNESFS 67

Query: 417 XXXXXXXXXXXXXXKHNIIFELRLRNPKSMFKFVSKSKLLGKAEISWMDVLHANEKSMEK 238
                         +  ++FELR RN   +   +  S+LLG+AE+ W  VL +    ME 
Sbjct: 68  LECIGTEDSINNLKQETVVFELRWRNTNPILAKIGGSQLLGRAEVPWKTVLESPNLEMES 127

Query: 237 CISFI-MFHRLSMDIKPPSLMVKMEALV--------TGKTTEMINGGHECDCEACQWIGC 85
            +  +     +  D+KPPS+ + M A V          +    +     C C       C
Sbjct: 128 WVMMVPKKGSVPDDVKPPSVQIAMRARVPEMAEMEKKNRRDGRLRKRDGCGCCKDSGCRC 187

Query: 84  EEDVFLAATAAFDAV 40
           E+    A   A +A+
Sbjct: 188 EDYEIFALVVALEAL 202


>emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]
          Length = 194

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
 Frame = -2

Query: 570 SLHCQLNILNLKNLDSLHHLHGQLFIRCYIPIASNKRFRIETQQLPF-------HTXXXX 412
           SL C++ I+  KN++      G+LF+R Y+   +N+R  + ++++          +    
Sbjct: 9   SLSCEIRIMRAKNIEL--KTEGKLFVRYYLSAGNNQRVGLNSREISSKSDLFWDESFSLE 66

Query: 411 XXXXXXXXXXXXKHNIIFELRLRNPKSMFKFVSKSKLLGKAEISWMDVLHANEKSMEKCI 232
                       +  ++FELR R+   +   V KS +LG+ EI W  V  + E  +EK +
Sbjct: 67  CLGSEESIQSLMQERVVFELRWRSKVPVLGRVRKSHVLGRVEIPWTSVFASKEMEIEKWV 126

Query: 231 SFIM--FHRLSMDIKPPSLMVKMEALV--TGKTTEMINGGHECDCE--ACQWIGCEEDVF 70
           S +      +  D +PP+L V M+  +    + +  +    EC C    C  +  +    
Sbjct: 127 SMVSTGSRVVDQDGQPPALQVAMKVRIPKVAERSRRVMKWDECGCTDGGCTCVDADHIFA 186

Query: 69  LAA 61
           LAA
Sbjct: 187 LAA 189


>ref|XP_002447949.1| hypothetical protein SORBIDRAFT_06g018650 [Sorghum bicolor]
           gi|241939132|gb|EES12277.1| hypothetical protein
           SORBIDRAFT_06g018650 [Sorghum bicolor]
          Length = 225

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 39/210 (18%)
 Frame = -2

Query: 570 SLHCQLNILNLKNLDSLH--HLHGQLFIRCYIPIASNKR-FRIETQQLPFHTXXXXXXXX 400
           SL   + ++ +  L+  H     G LF+R Y+P    +R  R++T+++P           
Sbjct: 11  SLELSVRVVRVDGLEQEHLEERGGSLFLRYYVPAGDGRRRLRVDTREVPCGGDLRWGELA 70

Query: 399 XXXXXXXXKHN--------------IIFELRLR-NPKSMFKFVS------------KSKL 301
                                    I+FELR R  P S     +             S++
Sbjct: 71  RFERWGGGHQPAATATAPAAAAAGAIVFELRWRPRPSSSSGLAAALLGAAGARVRPSSRV 130

Query: 300 LGKAEISWMDVLHANEKSMEKCISFIMFHRLSMDIKPPSLMVKMEALVTGKTT---EMIN 130
           L +AE+ W DV  A++ + E+ ++     R     K P L+V+++A+  G          
Sbjct: 131 LARAELPWADVSSASQPAAERWLTLSRVGRELAGCKAPKLLVEVKAVGHGDVAAERRTPG 190

Query: 129 GGHECDCEA------CQWIGCEEDVFLAAT 58
           GG    C A      C W+G EED+FLAAT
Sbjct: 191 GGMTACCRAAERCGQCGWVGSEEDMFLAAT 220


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