BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030603
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_186850.1| pentatricopeptide repeat-containing protein [Ar...   118   6e-25
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...   115   3e-24
ref|XP_002885940.1| pentatricopeptide repeat-containing protein ...   115   4e-24
ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat...   115   5e-24
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   115   5e-24

>ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At2g01510 gi|6091739|gb|AAF03451.1|AC010797_27
           hypothetical protein [Arabidopsis thaliana]
           gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical
           protein [Arabidopsis thaliana]
           gi|332640228|gb|AEE73749.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  118 bits (295), Expect = 6e-25
 Identities = 49/87 (56%), Positives = 69/87 (79%)
 Frame = +1

Query: 1   LKQRIEPDSVSFLNILSACSHAGLVDEGLEYFECMSTTYMIEPKKEHYTCVIDILGRVGQ 180
           ++  ++PDSVS L +L+ACSH G V++G EYF+ MS  Y I PKK+HY C++D+LGR G+
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604

Query: 181 FDKLEALIDAMPFEPDQIIWSSILNSC 261
           F + E L+D MPFEPD+I+WSS+LN+C
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNAC 631


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/83 (60%), Positives = 68/83 (81%)
 Frame = +1

Query: 13  IEPDSVSFLNILSACSHAGLVDEGLEYFECMSTTYMIEPKKEHYTCVIDILGRVGQFDKL 192
           ++P+SVSFL+IL ACSH GLV+EGL+YF  M+  Y +EP++EHY  ++D+L R G+FD+ 
Sbjct: 539 LQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEA 598

Query: 193 EALIDAMPFEPDQIIWSSILNSC 261
           E L+  MPFEPD+I+WSSILNSC
Sbjct: 599 EKLMARMPFEPDEIMWSSILNSC 621


>ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331780|gb|EFH62199.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 944

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/87 (55%), Positives = 68/87 (78%)
 Frame = +1

Query: 1   LKQRIEPDSVSFLNILSACSHAGLVDEGLEYFECMSTTYMIEPKKEHYTCVIDILGRVGQ 180
           ++  ++PDSVS L +L ACSH G V++G E+F+ MS  Y I PKK+HY C++D+LGR G+
Sbjct: 539 IQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGR 598

Query: 181 FDKLEALIDAMPFEPDQIIWSSILNSC 261
           F + E L+D MPFEPD+I+WSS+LN+C
Sbjct: 599 FAEAEKLMDEMPFEPDEIMWSSVLNAC 625


>ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/82 (63%), Positives = 66/82 (80%)
 Frame = +1

Query: 16  EPDSVSFLNILSACSHAGLVDEGLEYFECMSTTYMIEPKKEHYTCVIDILGRVGQFDKLE 195
           +PDSV+FL++LSACSH GL +E ++YFE M   Y I P KEHY+CVID LGRVG+FDK++
Sbjct: 540 KPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQ 599

Query: 196 ALIDAMPFEPDQIIWSSILNSC 261
            ++  MPFE D IIWSSIL+SC
Sbjct: 600 EMLGEMPFEDDPIIWSSILHSC 621


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499507|gb|AES80710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/87 (58%), Positives = 68/87 (78%)
 Frame = +1

Query: 1   LKQRIEPDSVSFLNILSACSHAGLVDEGLEYFECMSTTYMIEPKKEHYTCVIDILGRVGQ 180
           ++  ++PDSVS L+IL ACSH GLV+EGL+YF+ M+  Y + PKKEHY   ID+L R G+
Sbjct: 594 VRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGR 653

Query: 181 FDKLEALIDAMPFEPDQIIWSSILNSC 261
           FD+ E L+  MPFEPD+I+WSS+LNSC
Sbjct: 654 FDEAEKLMAQMPFEPDEIMWSSVLNSC 680