BLASTX nr result

ID: Dioscorea21_contig00030546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030546
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002282153.1| PREDICTED: probable transcription factor KAN...   108   6e-22
ref|XP_002510296.1| hypothetical protein RCOM_1592640 [Ricinus c...   106   2e-21
ref|XP_002301209.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21
ref|XP_003550354.1| PREDICTED: probable transcription factor KAN...    96   2e-18

>ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|222835412|gb|EEE73847.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  110 bits (274), Expect = 2e-22
 Identities = 74/142 (52%), Positives = 83/142 (58%), Gaps = 13/142 (9%)
 Frame = +3

Query: 3   FPDLSLQISPPSVNXXXXXXXGDEQTGRALIGDHNSMTDXXXXXXXEVSHEQPIFNRATR 182
           FPDLSLQISPPSV        G   T +AL  D +S TD       ++SHE    N+   
Sbjct: 7   FPDLSLQISPPSVEAKETGYDGG-LTRKALCSDRSSTTDSGSSGS-DLSHENGFLNQERS 64

Query: 183 ---------LSLGFD-ATQDNQILD-QRLLQHCHHPHPQIY--EFKRNSRQGNGGKRSIR 323
                    LSLGFD A   +Q L   R L H HH  PQIY   FKR++R  NG KRS+R
Sbjct: 65  YNLGPSEPTLSLGFDMADLSSQTLQLPRNLNH-HHHQPQIYGRNFKRSARMINGVKRSVR 123

Query: 324 APRMRWTTTLHAHFVHAVELLG 389
           APRMRWTTTLHAHFVHAV LLG
Sbjct: 124 APRMRWTTTLHAHFVHAVRLLG 145


>ref|XP_002282153.1| PREDICTED: probable transcription factor KAN4-like [Vitis vinifera]
          Length = 338

 Score =  108 bits (269), Expect = 6e-22
 Identities = 71/143 (49%), Positives = 83/143 (58%), Gaps = 15/143 (10%)
 Frame = +3

Query: 6   PDLSLQISPPSVNXXXXXXXG-DEQTGRALIGDHNSMTDXXXXXXXEVSHEQPIFNRAT- 179
           PDLSLQISPPS++       G D    ++   D +S TD       ++SHE   F+  + 
Sbjct: 8   PDLSLQISPPSISDCEVKEVGYDGFMKKSFYSDRSSATDSGSSGS-DLSHENGFFSPESG 66

Query: 180 --------RLSLGFDATQDNQ--ILDQRLLQHCHHPH-PQIY--EFKRNSRQGNGGKRSI 320
                    LSLG +    N   +   R L H HH H PQIY  EFKRNSR  NG KRSI
Sbjct: 67  FNRGPVEPMLSLGLEMAALNPPPLELPRNLHHNHHNHQPQIYGREFKRNSRMMNGSKRSI 126

Query: 321 RAPRMRWTTTLHAHFVHAVELLG 389
           RAPRMRWTTTLHAHFVHAV+LLG
Sbjct: 127 RAPRMRWTTTLHAHFVHAVQLLG 149


>ref|XP_002510296.1| hypothetical protein RCOM_1592640 [Ricinus communis]
           gi|223550997|gb|EEF52483.1| hypothetical protein
           RCOM_1592640 [Ricinus communis]
          Length = 347

 Score =  106 bits (265), Expect = 2e-21
 Identities = 71/148 (47%), Positives = 80/148 (54%), Gaps = 20/148 (13%)
 Frame = +3

Query: 6   PDLSLQISPPSVNXXXXXXXGDEQTG----RALIGDHNSMTDXXXXXXXEVSHEQPIFNR 173
           PDLSLQISPP  +       G    G    +AL  D +S TD       ++SHE    N+
Sbjct: 16  PDLSLQISPPLASDCEANEMGTNYNGGITWKALYCDRSSTTDSGSSGS-DLSHENGTLNQ 74

Query: 174 ATR-----------LSLGF---DATQDNQILDQRLLQHCHHPHPQIY--EFKRNSRQGNG 305
                         LSLGF   D T    +   R L H HH  PQIY  EFKRN R  +G
Sbjct: 75  ERSYNNNLGPSEPTLSLGFEMADMTTPPALQLPRNLNHHHHHQPQIYGREFKRNGRMISG 134

Query: 306 GKRSIRAPRMRWTTTLHAHFVHAVELLG 389
            KRSIRAPRMRWTTTLHAHFVHAV+LLG
Sbjct: 135 VKRSIRAPRMRWTTTLHAHFVHAVQLLG 162


>ref|XP_002301209.1| predicted protein [Populus trichocarpa] gi|222842935|gb|EEE80482.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  104 bits (259), Expect = 8e-21
 Identities = 67/143 (46%), Positives = 82/143 (57%), Gaps = 14/143 (9%)
 Frame = +3

Query: 3   FPDLSLQISPPSVNXXXXXXXGDEQTGRALIGDHNSMTDXXXXXXXEVSHEQPIFNR--- 173
           FP LSLQISPP+V              +AL  D +S TD       ++SHE  +FN+   
Sbjct: 8   FPYLSLQISPPAVLEAKETGDDGGLARKALCKDRSSATDSGSSGS-DLSHENGLFNQDRI 66

Query: 174 -------ATRLSLGFDATQDNQILDQ--RLLQHCHHPHPQIY--EFKRNSRQGNGGKRSI 320
                     LSLGFD    +    Q  R L H HH +PQIY  +FKR++R  +G +RS 
Sbjct: 67  AYNLGPSQPTLSLGFDMADLSSPSFQLPRNLNHLHHHNPQIYGGDFKRSARMISGVRRSK 126

Query: 321 RAPRMRWTTTLHAHFVHAVELLG 389
           RAPRMRWTTTLHAHFVHAV+LLG
Sbjct: 127 RAPRMRWTTTLHAHFVHAVQLLG 149


>ref|XP_003550354.1| PREDICTED: probable transcription factor KAN4-like [Glycine max]
          Length = 331

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 62/140 (44%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
 Frame = +3

Query: 6   PDLSLQISPPSVNXXXXXXXGDEQTGRALIGDHNSMTDXXXXXXXEVSHEQPIF----NR 173
           PDLSL ISPPS++            G+ L  D  S +D       ++SHE        +R
Sbjct: 20  PDLSLNISPPSISDSEAAKDVVGSFGKVLYSDICSTSDSGSSGGSDLSHEFHNLGHHHHR 79

Query: 174 ATRLSLGFDATQDNQILDQ-----RLLQHCHH---PHPQIYEFKRNSRQGNGGKRSIRAP 329
              L LGF     N    Q     R   H HH   PH    +FKR++R  NG KRS+RAP
Sbjct: 80  EPTLKLGFGTVDLNPHHHQVQGVPRSFNHHHHLLQPHIYGRDFKRSARVVNGVKRSVRAP 139

Query: 330 RMRWTTTLHAHFVHAVELLG 389
           RMRWTTTLHAHFVHAV+LLG
Sbjct: 140 RMRWTTTLHAHFVHAVQLLG 159


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