BLASTX nr result

ID: Dioscorea21_contig00030534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030534
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518741.1| conserved hypothetical protein [Ricinus comm...    82   4e-14
ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203...    80   2e-13
ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago ...    69   4e-10
ref|NP_001056903.1| Os06g0164500 [Oryza sativa Japonica Group] g...    65   6e-09

>ref|XP_002518741.1| conserved hypothetical protein [Ricinus communis]
           gi|223542122|gb|EEF43666.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 445

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 43/87 (49%), Positives = 50/87 (57%)
 Frame = +2

Query: 59  PDHFRLSFGISSSTFEWLSSLLDPLLDCRDXXXXXXXXXXXXXXXXXXXXXXXGCPYSDL 238
           PD FR  F + +STFEWLS LL+PLLDCRD                       G  YS++
Sbjct: 107 PDSFRTFFKMKASTFEWLSGLLEPLLDCRDPIGSPLSLSAELRLGVGLFRLATGSNYSEI 166

Query: 239 AHRFRVPESTARFSARRLYRVLCTNFR 319
           A RF V ES ARF A++L RVLCTNFR
Sbjct: 167 ADRFGVTESAARFCAKQLCRVLCTNFR 193


>ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|222845986|gb|EEE83533.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/96 (44%), Positives = 52/96 (54%)
 Frame = +2

Query: 32  GALLLPRPAPDHFRLSFGISSSTFEWLSSLLDPLLDCRDXXXXXXXXXXXXXXXXXXXXX 211
           G L    P PD F+ +F + SSTFEWLS LL+PLL+CRD                     
Sbjct: 90  GELSRVAPNPDSFKTTFRMRSSTFEWLSGLLEPLLECRDPIGTPINLSSELRLGIGLFRL 149

Query: 212 XXGCPYSDLAHRFRVPESTARFSARRLYRVLCTNFR 319
             G  Y ++A RF V ES  RF A++L RVLCTNFR
Sbjct: 150 ATGSSYIEIAGRFGVTESVTRFCAKQLCRVLCTNFR 185


>ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203312 [Cucumis sativus]
           gi|449501700|ref|XP_004161442.1| PREDICTED:
           uncharacterized LOC101203312 [Cucumis sativus]
          Length = 386

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/98 (43%), Positives = 54/98 (55%)
 Frame = +2

Query: 26  HHGALLLPRPAPDHFRLSFGISSSTFEWLSSLLDPLLDCRDXXXXXXXXXXXXXXXXXXX 205
           HH   L     PD FR  F ++SSTFEWLS LL+PLL+CRD                   
Sbjct: 89  HH---LFRTRTPDSFRNHFRMTSSTFEWLSGLLEPLLECRDPVGSPLDLSVEIRLGVGLY 145

Query: 206 XXXXGCPYSDLAHRFRVPESTARFSARRLYRVLCTNFR 319
               GC +S ++ +F V ES ARF +++L RVLCTNFR
Sbjct: 146 RLATGCDFSTISDQFGVSESVARFCSKQLCRVLCTNFR 183


>ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago truncatula]
           gi|355509008|gb|AES90150.1| hypothetical protein
           MTR_4g085850 [Medicago truncatula]
          Length = 399

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = +2

Query: 53  PAPDHFRLSFGISSSTFEWLSSLLDPLLDCRD-XXXXXXXXXXXXXXXXXXXXXXXGCPY 229
           P PD F  +F ++SSTFEWL++LL+PLL+CRD                        G  Y
Sbjct: 75  PNPDWFPTTFLMTSSTFEWLTNLLEPLLECRDPAYLLPLNLTAGVRLGIGLFRLASGSDY 134

Query: 230 SDLAHRFRVPESTARFSARRLYRVLCTNFR 319
             +A++F V  S A+F  ++L RVLCTNFR
Sbjct: 135 QQIANQFNVTVSVAKFCVKQLCRVLCTNFR 164


>ref|NP_001056903.1| Os06g0164500 [Oryza sativa Japonica Group]
           gi|55296134|dbj|BAD67852.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|113594943|dbj|BAF18817.1|
           Os06g0164500 [Oryza sativa Japonica Group]
          Length = 370

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/106 (39%), Positives = 53/106 (50%)
 Frame = +2

Query: 2   PPLQAPPDHHGALLLPRPAPDHFRLSFGISSSTFEWLSSLLDPLLDCRDXXXXXXXXXXX 181
           P LQ  P+    L LP  +PDH+ L+F +S+ TF +L+ LLDPLL               
Sbjct: 53  PSLQPEPE---PLPLPPTSPDHYPLAFRVSAPTFNFLAGLLDPLLS-------HPSLPSS 102

Query: 182 XXXXXXXXXXXXGCPYSDLAHRFRVPESTARFSARRLYRVLCTNFR 319
                       G PY+ LA  FRVP S  R ++RRL RVL  NFR
Sbjct: 103 TLLALALARLATGLPYATLAALFRVPASAPRAASRRLRRVLLANFR 148


Top