BLASTX nr result

ID: Dioscorea21_contig00030529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030529
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]   298   4e-79
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                 296   2e-78
emb|CAA73042.1| polyprotein [Ananas comosus]                          294   8e-78
gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Ja...   283   1e-74
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                283   1e-74

>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
          Length = 596

 Score =  298 bits (763), Expect = 4e-79
 Identities = 132/188 (70%), Positives = 166/188 (88%)
 Frame = -3

Query: 566 CDFWLDSVAFLGHVISKDGVSVDPKKVEAVVDWKRPSTVREIRSFLGLAGYYRRFVQDFS 387
           C+FWLD ++FLGHV+S DG+SVDP KV+AV +W+RPSTV EIRSFLGLAGYYRRF++ F 
Sbjct: 56  CEFWLDRISFLGHVVSNDGISVDPGKVDAVANWRRPSTVTEIRSFLGLAGYYRRFIEGFY 115

Query: 386 RLAAPLTRLTRKGARFFWTEACEQSFLELKHRLISAPVLALPESGRGYVIFSDACKTGLG 207
           ++A PLT+LT+KG +F W++ CE SF ELK++L+SAP+L +P    G+V++SDA   GLG
Sbjct: 116 KIALPLTKLTQKGVKFEWSDDCECSFQELKNKLVSAPILTIPSGSGGFVVYSDASHQGLG 175

Query: 206 CVLMQNGRVIAYASRQLKPHEENYPTHDLELAAVVFALKIWRHFLYGEPCEVYTDHKSLK 27
           CVLMQ+GRV+AYASRQLKP+E+NYPTHDLELAAVVFALKIWRHFL+GE CE++TDHKSLK
Sbjct: 176 CVLMQHGRVVAYASRQLKPYEKNYPTHDLELAAVVFALKIWRHFLFGETCEIFTDHKSLK 235

Query: 26  YIFTQKEL 3
           Y+F+QKEL
Sbjct: 236 YLFSQKEL 243


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score =  296 bits (757), Expect = 2e-78
 Identities = 136/188 (72%), Positives = 161/188 (85%)
 Frame = -3

Query: 566 CDFWLDSVAFLGHVISKDGVSVDPKKVEAVVDWKRPSTVREIRSFLGLAGYYRRFVQDFS 387
           C+FWL  V+FLGHV+SK GVSVDP K+EAV  W RPSTV E+RSFLGLAGYYRRFV++FS
Sbjct: 182 CEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 241

Query: 386 RLAAPLTRLTRKGARFFWTEACEQSFLELKHRLISAPVLALPESGRGYVIFSDACKTGLG 207
           R+A PLT+LTRKGA F W++ACE SF  LK +L++APVL +P+    +VI+SDA K GLG
Sbjct: 242 RIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLG 301

Query: 206 CVLMQNGRVIAYASRQLKPHEENYPTHDLELAAVVFALKIWRHFLYGEPCEVYTDHKSLK 27
           CVLMQ G+V+AYASRQLK HE+NYPTHDLELAAVVFALKIWRH+LYGE  +++TDHKSLK
Sbjct: 302 CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK 361

Query: 26  YIFTQKEL 3
           Y FTQKEL
Sbjct: 362 YFFTQKEL 369


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  294 bits (752), Expect = 8e-78
 Identities = 135/188 (71%), Positives = 162/188 (86%)
 Frame = -3

Query: 566 CDFWLDSVAFLGHVISKDGVSVDPKKVEAVVDWKRPSTVREIRSFLGLAGYYRRFVQDFS 387
           C+FWL  VAFLGH+IS  G++VDPKK+EA+ DW R ++V EIRSFLGLAGYYRRFV+ F+
Sbjct: 206 CEFWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFA 265

Query: 386 RLAAPLTRLTRKGARFFWTEACEQSFLELKHRLISAPVLALPESGRGYVIFSDACKTGLG 207
           +L+ PLTRLT KG +F W +ACE+SF ELK RL +AP+L LP +G GYV++SDA   GLG
Sbjct: 266 KLSTPLTRLTHKGVKFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVYSDASLNGLG 325

Query: 206 CVLMQNGRVIAYASRQLKPHEENYPTHDLELAAVVFALKIWRHFLYGEPCEVYTDHKSLK 27
           CVLMQ+ +VIAYASRQLK +E+NYPTHDLELAAVVFALK+WRH+LYGE CEVYTDHKSLK
Sbjct: 326 CVLMQDDKVIAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLK 385

Query: 26  YIFTQKEL 3
           Y+FTQKEL
Sbjct: 386 YLFTQKEL 393


>gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1449

 Score =  283 bits (725), Expect = 1e-74
 Identities = 129/188 (68%), Positives = 157/188 (83%)
 Frame = -3

Query: 566  CDFWLDSVAFLGHVISKDGVSVDPKKVEAVVDWKRPSTVREIRSFLGLAGYYRRFVQDFS 387
            C+FWL  V FLGHVIS  GV+VDP  VE+V+ WK+P TV E+RSFLGLAGYYRRF+++FS
Sbjct: 701  CEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFS 760

Query: 386  RLAAPLTRLTRKGARFFWTEACEQSFLELKHRLISAPVLALPESGRGYVIFSDACKTGLG 207
            ++A P+TRL +K  ++ WTE CEQSF ELK RL++APVL LP+S +G+ ++ DA + GLG
Sbjct: 761  KIARPMTRLLQKEVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLG 820

Query: 206  CVLMQNGRVIAYASRQLKPHEENYPTHDLELAAVVFALKIWRHFLYGEPCEVYTDHKSLK 27
            CVLMQ G+V+AYASRQL+PHE NYPTHDLELAAVV ALKIWRH+LYG   EVYTDHKSLK
Sbjct: 821  CVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEVYTDHKSLK 880

Query: 26   YIFTQKEL 3
            YIFTQ +L
Sbjct: 881  YIFTQPDL 888


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  283 bits (724), Expect = 1e-74
 Identities = 128/188 (68%), Positives = 157/188 (83%)
 Frame = -3

Query: 566  CDFWLDSVAFLGHVISKDGVSVDPKKVEAVVDWKRPSTVREIRSFLGLAGYYRRFVQDFS 387
            C+FWL  V FLGHVIS  GV+VDP  VE+V+ WK+P TV E+RSFLGLAGYYRRF+++FS
Sbjct: 733  CEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFS 792

Query: 386  RLAAPLTRLTRKGARFFWTEACEQSFLELKHRLISAPVLALPESGRGYVIFSDACKTGLG 207
            ++A P+TRL +K  +F WTE CE+SF ELK RL++APVL LP+S +G+ ++ DA + GLG
Sbjct: 793  KIARPMTRLLQKEVKFKWTEDCERSFQELKERLVTAPVLILPDSRKGFQVYCDASRLGLG 852

Query: 206  CVLMQNGRVIAYASRQLKPHEENYPTHDLELAAVVFALKIWRHFLYGEPCEVYTDHKSLK 27
            CVLMQ G+V+AYASRQL+PHE NYPTHDLELAAVV ALKIWRH+LYG   E+YTDHKSLK
Sbjct: 853  CVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLK 912

Query: 26   YIFTQKEL 3
            YIFTQ +L
Sbjct: 913  YIFTQPDL 920


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