BLASTX nr result

ID: Dioscorea21_contig00030512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030512
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95217.1| unknown [Populus trichocarpa]                          124   1e-26
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]           120   9e-26
ref|XP_002511436.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...   118   4e-25
ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   118   4e-25

>gb|ABK95217.1| unknown [Populus trichocarpa]
          Length = 86

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/79 (75%), Positives = 68/79 (86%)
 Frame = -3

Query: 466 MEKMGVAEPQLEDLFKQKEHARNPLVPIGAFVTAGVLTAGLISFRQGKSQLGQKLMRARV 287
           MEKMG AEP  E LF++K+  RNPLVP+GA +TAGVLTAGLISFR+G SQLGQ LMRARV
Sbjct: 1   MEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 60

Query: 286 VAQGATVALMFGSAYYYGD 230
           V QGATVALM G+A+YYGD
Sbjct: 61  VVQGATVALMVGTAFYYGD 79


>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/79 (73%), Positives = 67/79 (84%)
 Frame = -3

Query: 466 MEKMGVAEPQLEDLFKQKEHARNPLVPIGAFVTAGVLTAGLISFRQGKSQLGQKLMRARV 287
           +EKM   EP +EDLF++K+  RNPLVP+GA +TAGVLTAGLISFR+G SQLGQ LMRARV
Sbjct: 12  LEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 71

Query: 286 VAQGATVALMFGSAYYYGD 230
           V QGATVALM G+ YYYGD
Sbjct: 72  VVQGATVALMVGTGYYYGD 90


>ref|XP_002511436.1| conserved hypothetical protein [Ricinus communis]
           gi|223550551|gb|EEF52038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -3

Query: 457 MGVAEPQLEDLFKQKEHARNPLVPIGAFVTAGVLTAGLISFRQGKSQLGQKLMRARVVAQ 278
           MG AEP LE LF++K+  RNPLVP+GA +TAGVLTAGLISFR+G S LGQ LMRARVV Q
Sbjct: 1   MGTAEPNLEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSHLGQILMRARVVVQ 60

Query: 277 GATVALMFGSAYYYGD 230
           GATVALM G+AYYYGD
Sbjct: 61  GATVALMVGTAYYYGD 76


>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = -3

Query: 466 MEKMGVAEPQLEDLFKQKEHARNPLVPIGAFVTAGVLTAGLISFRQGKSQLGQKLMRARV 287
           MEKMG A+ +++ LF+QK+  +NPLVPIGA +TAGVLTAGLISF++G S LGQKLMRARV
Sbjct: 1   MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60

Query: 286 VAQGATVALMFGSAYYYGDQ 227
           V QGATVALM  +AYYYG++
Sbjct: 61  VVQGATVALMLSTAYYYGEK 80


>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/76 (76%), Positives = 63/76 (82%)
 Frame = -3

Query: 457 MGVAEPQLEDLFKQKEHARNPLVPIGAFVTAGVLTAGLISFRQGKSQLGQKLMRARVVAQ 278
           MG  EP  ED  ++K+  RNP VPIGA +TAGVLTAGLISFRQG SQLGQKLMRARVV Q
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 277 GATVALMFGSAYYYGD 230
           GATVALM G+AYYYGD
Sbjct: 61  GATVALMVGTAYYYGD 76


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