BLASTX nr result

ID: Dioscorea21_contig00030505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030505
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containin...    75   6e-12
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...    75   6e-12
emb|CBI36846.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...    74   1e-11
ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    74   1e-11

>ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like,
           partial [Cucumis sativus]
          Length = 432

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = +3

Query: 36  LGAPMAGEGSGSADPPFGLPHPLPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFL 215
           + +  +   S S+ P   +   LPVM++R +I+EKI++NRVTLIVG+TGCGKSSQ+PQFL
Sbjct: 1   MASSSSSSSSSSSSPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIPQFL 60

Query: 216 LEED 227
           LEED
Sbjct: 61  LEED 64


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
           vinifera]
          Length = 1014

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +3

Query: 102 LPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227
           LPVMA+R KI+EKI ENRVTLIVG+TGCGKSSQVPQFLLEE+
Sbjct: 20  LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEEN 61


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +3

Query: 102 LPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227
           LPVMA+R KI+EKI ENRVTLIVG+TGCGKSSQVPQFLLEE+
Sbjct: 20  LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEEN 61


>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355480579|gb|AES61782.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1035

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/42 (78%), Positives = 41/42 (97%)
 Frame = +3

Query: 102 LPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227
           LPVM+MR KI++KIQ+NRVTLI+G+TGCGKSSQ+PQFLLEE+
Sbjct: 30  LPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEEN 71


>ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 31-like [Cucumis sativus]
          Length = 998

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
 Frame = +3

Query: 63  SGSADPPFGLPHPL-----PVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227
           S S+      P PL     PVM++R +I+EKI++NRVTLIVG+TGCGKSSQ+PQFLLEED
Sbjct: 3   SSSSSSSXSSPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIPQFLLEED 62


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