BLASTX nr result
ID: Dioscorea21_contig00030505
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030505 (227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containin... 75 6e-12 ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin... 75 6e-12 emb|CBI36846.3| unnamed protein product [Vitis vinifera] 75 6e-12 ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [... 74 1e-11 ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 74 1e-11 >ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like, partial [Cucumis sativus] Length = 432 Score = 75.1 bits (183), Expect = 6e-12 Identities = 36/64 (56%), Positives = 49/64 (76%) Frame = +3 Query: 36 LGAPMAGEGSGSADPPFGLPHPLPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFL 215 + + + S S+ P + LPVM++R +I+EKI++NRVTLIVG+TGCGKSSQ+PQFL Sbjct: 1 MASSSSSSSSSSSSPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIPQFL 60 Query: 216 LEED 227 LEED Sbjct: 61 LEED 64 >ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis vinifera] Length = 1014 Score = 75.1 bits (183), Expect = 6e-12 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +3 Query: 102 LPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227 LPVMA+R KI+EKI ENRVTLIVG+TGCGKSSQVPQFLLEE+ Sbjct: 20 LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEEN 61 >emb|CBI36846.3| unnamed protein product [Vitis vinifera] Length = 1007 Score = 75.1 bits (183), Expect = 6e-12 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +3 Query: 102 LPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227 LPVMA+R KI+EKI ENRVTLIVG+TGCGKSSQVPQFLLEE+ Sbjct: 20 LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEEN 61 >ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355480579|gb|AES61782.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 1035 Score = 74.3 bits (181), Expect = 1e-11 Identities = 33/42 (78%), Positives = 41/42 (97%) Frame = +3 Query: 102 LPVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227 LPVM+MR KI++KIQ+NRVTLI+G+TGCGKSSQ+PQFLLEE+ Sbjct: 30 LPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEEN 71 >ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 31-like [Cucumis sativus] Length = 998 Score = 73.9 bits (180), Expect = 1e-11 Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 5/60 (8%) Frame = +3 Query: 63 SGSADPPFGLPHPL-----PVMAMRGKILEKIQENRVTLIVGDTGCGKSSQVPQFLLEED 227 S S+ P PL PVM++R +I+EKI++NRVTLIVG+TGCGKSSQ+PQFLLEED Sbjct: 3 SSSSSSSXSSPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIPQFLLEED 62