BLASTX nr result

ID: Dioscorea21_contig00030492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030492
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41035.1| zinc finger C-x8-C-x5-C-x3-H type family protein ...    59   4e-07
gb|AEV40984.1| zinc finger C-x8-C-x5-C-x3-H type family protein ...    59   4e-07
ref|XP_002448746.1| hypothetical protein SORBIDRAFT_06g032480 [S...    58   9e-07
gb|ADX60253.1| C3H-related transcription factor [Oryza sativa Ja...    56   3e-06
emb|CAH67704.1| H0624F09.12 [Oryza sativa Indica Group] gi|12555...    56   3e-06

>gb|AEV41035.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza minuta]
          Length = 711

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +2

Query: 2   HQHLGSEL--RRGSSKRVADRQLMHER--VREKKNLDQMDGSDLRHQLKRKRLNGSRSAI 169
           H + G E   RR SS+R  +R    ER  ++  +   +MDGSDLRH+L+R+R+NGS  AI
Sbjct: 349 HMYNGYERKRRRSSSERNMERPFHSERRFLQRDRERVEMDGSDLRHRLRRRRINGSSLAI 408

Query: 170 SPDRRARPFWRDDHRAEERYRD 235
           SP+R       +  R +ERYR+
Sbjct: 409 SPERNG-----EQRRRDERYRE 425


>gb|AEV40984.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza punctata]
          Length = 712

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = +2

Query: 26  RRGSSKRVADRQLMHER--VREKKNLDQMDGSDLRHQLKRKRLNGSRSAISPDRRARPFW 199
           RR SS+R  +R    ER  ++  +   +MDGSDLRH+L+R+R+NGS  AISP+R      
Sbjct: 359 RRSSSERSMERPFHSERRFLQRDRERVEMDGSDLRHRLRRRRINGSSLAISPERNG---- 414

Query: 200 RDDHRAEERYRD 235
            +  R +ERYR+
Sbjct: 415 -EQRRRDERYRE 425


>ref|XP_002448746.1| hypothetical protein SORBIDRAFT_06g032480 [Sorghum bicolor]
           gi|241939929|gb|EES13074.1| hypothetical protein
           SORBIDRAFT_06g032480 [Sorghum bicolor]
          Length = 690

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 26  RRGSSKRVADRQLMHER--VREKKNLDQMDGSDLRHQLKRKRLNGSRSAISPDRRARPFW 199
           RR SS+R  DR    +R  +  + + D++DGSDLRHQL+R+R+NG  +AISP++      
Sbjct: 342 RRSSSERSLDRPYHPDRRFLHRELDRDKIDGSDLRHQLRRRRINGPSTAISPEQAN---- 397

Query: 200 RDDHRAEERYRD 235
            D H  +ERYR+
Sbjct: 398 GDRHWRDERYRE 409


>gb|ADX60253.1| C3H-related transcription factor [Oryza sativa Japonica Group]
          Length = 711

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = +2

Query: 2   HQHLGSEL-RRGSSKRVADRQLMHERVREKKNLD--QMDGSDLRHQLKRKRLNGSRSAIS 172
           H + G E  RR SS+R  +R    ER   +++ D  +MDGSDLRH+L+R+R+N S  AIS
Sbjct: 351 HMYDGYERKRRRSSERSMERPFHSERRFLQRDRDRVEMDGSDLRHRLRRRRINESSLAIS 410

Query: 173 PDRRARPFWRDDHRAEERYRD 235
           P+R       +  R +ERYR+
Sbjct: 411 PERNG-----EQRRRDERYRE 426


>emb|CAH67704.1| H0624F09.12 [Oryza sativa Indica Group] gi|125550180|gb|EAY96002.1|
           hypothetical protein OsI_17873 [Oryza sativa Indica
           Group]
          Length = 711

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = +2

Query: 2   HQHLGSEL-RRGSSKRVADRQLMHERVREKKNLD--QMDGSDLRHQLKRKRLNGSRSAIS 172
           H + G E  RR SS+R  +R    ER   +++ D  +MDGSDLRH+L+R+R+N S  AIS
Sbjct: 351 HMYDGYERKRRRSSERSMERPFHSERRFLQRDRDRVEMDGSDLRHRLRRRRINESSLAIS 410

Query: 173 PDRRARPFWRDDHRAEERYRD 235
           P+R       +  R +ERYR+
Sbjct: 411 PERNG-----EQQRRDERYRE 426


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