BLASTX nr result

ID: Dioscorea21_contig00030485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030485
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305356.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002527615.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002280026.1| PREDICTED: uncharacterized protein LOC100244...    62   6e-08
gb|AFK40257.1| unknown [Lotus japonicus]                               60   1e-07
gb|ACZ74665.1| hydroxyproline-rich protein [Phaseolus vulgaris]        60   1e-07

>ref|XP_002305356.1| predicted protein [Populus trichocarpa] gi|222848320|gb|EEE85867.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 85  KSITPVHLQVPKQSEFPERYMSPTDMIISPVSKGLLARNQKKG 213
           KS  P HLQVPK  +FPERY SPTD++ISP++KGLLARN+K G
Sbjct: 87  KSSAPYHLQVPKAFKFPERYRSPTDLMISPITKGLLARNRKGG 129


>ref|XP_002527615.1| conserved hypothetical protein [Ricinus communis]
           gi|223532989|gb|EEF34754.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/58 (50%), Positives = 40/58 (68%)
 Frame = +1

Query: 34  QSMAKQTPPLNPNPKQIKSITPVHLQVPKQSEFPERYMSPTDMIISPVSKGLLARNQK 207
           Q     +  LN +    KS TP  L+VPK  ++PERY SPTD+++SP++KGLLARN+K
Sbjct: 27  QDQKMDSKSLNSSGDLRKSSTPDRLKVPKAFKYPERYRSPTDLMVSPITKGLLARNRK 84


>ref|XP_002280026.1| PREDICTED: uncharacterized protein LOC100244709 isoform 1 [Vitis
           vinifera] gi|296082203|emb|CBI21208.3| unnamed protein
           product [Vitis vinifera]
          Length = 112

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 10/65 (15%)
 Frame = +1

Query: 49  QTPPLNPNPKQI----------KSITPVHLQVPKQSEFPERYMSPTDMIISPVSKGLLAR 198
           +TPP N    Q           K+ TP  L+VPK  ++PERY SPTD++ISPVSKGLLAR
Sbjct: 23  KTPPPNQETAQKIQNSANDSGNKTATPDRLKVPKAFKYPERYRSPTDLMISPVSKGLLAR 82

Query: 199 NQKKG 213
           ++K G
Sbjct: 83  SRKTG 87


>gb|AFK40257.1| unknown [Lotus japonicus]
          Length = 129

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
 Frame = +1

Query: 55  PPLNPNPKQI----KSITPVHLQVPKQSEFPERYMSPTDMIISPVSKGLLARNQK 207
           PP N +P       KS+ P  L+VPK  +FPERY SPTD I+SPV+KGLLAR +K
Sbjct: 32  PPQNDDPNSTDELRKSLIPDPLRVPKAFKFPERYTSPTDSIMSPVTKGLLARGKK 86


>gb|ACZ74665.1| hydroxyproline-rich protein [Phaseolus vulgaris]
          Length = 133

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/46 (54%), Positives = 38/46 (82%)
 Frame = +1

Query: 88  SITPVHLQVPKQSEFPERYMSPTDMIISPVSKGLLARNQKKGLGSS 225
           ++TP HL+VPK  ++PERY SPTD+++SP++KGLLAR ++ G G +
Sbjct: 50  TVTPDHLRVPKAFKYPERYTSPTDLMMSPITKGLLARTKRGGGGGA 95


Top