BLASTX nr result
ID: Dioscorea21_contig00030476
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030476 (463 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003616665.1| RING finger protein [Medicago truncatula] gi... 89 5e-16 ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like... 87 2e-15 ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like... 87 2e-15 gb|ACU23806.1| unknown [Glycine max] 87 2e-15 gb|AFK39456.1| unknown [Medicago truncatula] 85 7e-15 >ref|XP_003616665.1| RING finger protein [Medicago truncatula] gi|355518000|gb|AES99623.1| RING finger protein [Medicago truncatula] Length = 170 Score = 88.6 bits (218), Expect = 5e-16 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 3/75 (4%) Frame = +3 Query: 3 NTIKNLPIESHQARSST---DESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSGQ 173 + IK LPI HQ+ +S +E++C ICL+ +GEKVKVLPSC H FH +CVD WL Sbjct: 79 DAIKKLPIILHQSNTSNHALEETECCICLSTFRDGEKVKVLPSCDHYFHCECVDAWLVNH 138 Query: 174 SSCPLCRASLGEDHE 218 SSCPLCRASL D E Sbjct: 139 SSCPLCRASLKIDLE 153 >ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max] Length = 175 Score = 86.7 bits (213), Expect = 2e-15 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 5/71 (7%) Frame = +3 Query: 6 TIKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSG 170 +IK LPI H A S+ DE++C ICL +GEKVKVLP+C H FH DCVD WL+ Sbjct: 83 SIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLTH 142 Query: 171 QSSCPLCRASL 203 SSCPLCRASL Sbjct: 143 HSSCPLCRASL 153 >ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max] Length = 175 Score = 86.7 bits (213), Expect = 2e-15 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 5/71 (7%) Frame = +3 Query: 6 TIKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSG 170 +IK LPI H A S+ DE++C ICL +GEKVKVLP+C H FH DCVD WL+ Sbjct: 83 SIKKLPIILHHAPADRDESAWDETECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLTH 142 Query: 171 QSSCPLCRASL 203 SSCPLCRASL Sbjct: 143 HSSCPLCRASL 153 >gb|ACU23806.1| unknown [Glycine max] Length = 175 Score = 86.7 bits (213), Expect = 2e-15 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 5/71 (7%) Frame = +3 Query: 6 TIKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSG 170 +IK LPI H A S+ DE++C ICL +GEKVKVLP+C H FH DCVD WL+ Sbjct: 83 SIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLTH 142 Query: 171 QSSCPLCRASL 203 SSCPLCRASL Sbjct: 143 HSSCPLCRASL 153 >gb|AFK39456.1| unknown [Medicago truncatula] Length = 173 Score = 84.7 bits (208), Expect = 7e-15 Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 5/70 (7%) Frame = +3 Query: 9 IKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSGQ 173 IK LPI HQA + +E++C ICL +GEK+KVLP C+H FH DCVD WL+ Q Sbjct: 82 IKKLPIILHQAPTDPENGAWEETECCICLGEFRDGEKLKVLPGCEHYFHCDCVDKWLTHQ 141 Query: 174 SSCPLCRASL 203 SSCPLCR SL Sbjct: 142 SSCPLCRGSL 151