BLASTX nr result

ID: Dioscorea21_contig00030476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030476
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616665.1| RING finger protein [Medicago truncatula] gi...    89   5e-16
ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like...    87   2e-15
ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like...    87   2e-15
gb|ACU23806.1| unknown [Glycine max]                                   87   2e-15
gb|AFK39456.1| unknown [Medicago truncatula]                           85   7e-15

>ref|XP_003616665.1| RING finger protein [Medicago truncatula]
           gi|355518000|gb|AES99623.1| RING finger protein
           [Medicago truncatula]
          Length = 170

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = +3

Query: 3   NTIKNLPIESHQARSST---DESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSGQ 173
           + IK LPI  HQ+ +S    +E++C ICL+   +GEKVKVLPSC H FH +CVD WL   
Sbjct: 79  DAIKKLPIILHQSNTSNHALEETECCICLSTFRDGEKVKVLPSCDHYFHCECVDAWLVNH 138

Query: 174 SSCPLCRASLGEDHE 218
           SSCPLCRASL  D E
Sbjct: 139 SSCPLCRASLKIDLE 153


>ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = +3

Query: 6   TIKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSG 170
           +IK LPI  H A      S+ DE++C ICL    +GEKVKVLP+C H FH DCVD WL+ 
Sbjct: 83  SIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLTH 142

Query: 171 QSSCPLCRASL 203
            SSCPLCRASL
Sbjct: 143 HSSCPLCRASL 153


>ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = +3

Query: 6   TIKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSG 170
           +IK LPI  H A      S+ DE++C ICL    +GEKVKVLP+C H FH DCVD WL+ 
Sbjct: 83  SIKKLPIILHHAPADRDESAWDETECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLTH 142

Query: 171 QSSCPLCRASL 203
            SSCPLCRASL
Sbjct: 143 HSSCPLCRASL 153


>gb|ACU23806.1| unknown [Glycine max]
          Length = 175

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = +3

Query: 6   TIKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSG 170
           +IK LPI  H A      S+ DE++C ICL    +GEKVKVLP+C H FH DCVD WL+ 
Sbjct: 83  SIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLTH 142

Query: 171 QSSCPLCRASL 203
            SSCPLCRASL
Sbjct: 143 HSSCPLCRASL 153


>gb|AFK39456.1| unknown [Medicago truncatula]
          Length = 173

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 5/70 (7%)
 Frame = +3

Query: 9   IKNLPIESHQA-----RSSTDESQCSICLANMVNGEKVKVLPSCKHAFHPDCVDLWLSGQ 173
           IK LPI  HQA       + +E++C ICL    +GEK+KVLP C+H FH DCVD WL+ Q
Sbjct: 82  IKKLPIILHQAPTDPENGAWEETECCICLGEFRDGEKLKVLPGCEHYFHCDCVDKWLTHQ 141

Query: 174 SSCPLCRASL 203
           SSCPLCR SL
Sbjct: 142 SSCPLCRGSL 151


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