BLASTX nr result

ID: Dioscorea21_contig00030401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030401
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38614.1| unknown [Lotus japonicus]                              134   8e-30
ref|XP_002310165.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
gb|ABK96307.1| unknown [Populus trichocarpa x Populus deltoides]      134   1e-29
ref|XP_002985947.1| hypothetical protein SELMODRAFT_446437 [Sela...   134   1e-29
gb|ADE75727.1| unknown [Picea sitchensis]                             134   1e-29

>gb|AFK38614.1| unknown [Lotus japonicus]
          Length = 218

 Score =  134 bits (338), Expect = 8e-30
 Identities = 65/114 (57%), Positives = 82/114 (71%), Gaps = 8/114 (7%)
 Frame = -3

Query: 461 MSCQTWQLDELEVEPLEIREVLRCIVHTIMFHRVLGLVRPKDTDSELFEITYVKCGDEEL 282
           M+C+  QL ELEVE  EIRE+LRCI+HT++FHR LGLVRPKD D ELF++TYV+CG+ EL
Sbjct: 1   MNCEVCQLKELEVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGELEL 60

Query: 281 ERKIEEKIDQLIIWIEKHPNKKISVVTA--------ISLFDNSIFSPYI*SFYI 144
           E+KIEEKI+Q I W+EKHPNKK  +  +        +S F N I   Y   +YI
Sbjct: 61  EKKIEEKIEQFICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYI 114


>ref|XP_002310165.1| predicted protein [Populus trichocarpa] gi|222853068|gb|EEE90615.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = -3

Query: 461 MSCQTWQLDELEVEPLEIREVLRCIVHTIMFHRVLGLVRPKDTDSELFEITYVKCGDEEL 282
           M+C+  QL ELEVE  EIREVLRCI+HTI+FHR LGLVRPKD D ELF+ITYV+CG+ EL
Sbjct: 1   MNCEVCQLKELEVEHFEIREVLRCILHTIVFHRALGLVRPKDIDLELFDITYVQCGEVEL 60

Query: 281 ERKIEEKIDQLIIWIEKHPNKKISV 207
           E+KIEEKIDQ I W+EKHPNKK  +
Sbjct: 61  EKKIEEKIDQFISWVEKHPNKKSQI 85


>gb|ABK96307.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 216

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = -3

Query: 461 MSCQTWQLDELEVEPLEIREVLRCIVHTIMFHRVLGLVRPKDTDSELFEITYVKCGDEEL 282
           M+C+  QL ELEVE  EIREVLRCI+HTI+FHR LGLVRPKD D ELF+ITYV+CG+ EL
Sbjct: 1   MNCEVCQLKELEVEHFEIREVLRCILHTIVFHRALGLVRPKDIDLELFDITYVQCGEVEL 60

Query: 281 ERKIEEKIDQLIIWIEKHPNKKISV 207
           E+KIEEKIDQ I W+EKHPNKK  +
Sbjct: 61  EKKIEEKIDQFISWVEKHPNKKSQI 85


>ref|XP_002985947.1| hypothetical protein SELMODRAFT_446437 [Selaginella moellendorffii]
           gi|300146454|gb|EFJ13124.1| hypothetical protein
           SELMODRAFT_446437 [Selaginella moellendorffii]
          Length = 217

 Score =  134 bits (336), Expect = 1e-29
 Identities = 59/85 (69%), Positives = 75/85 (88%)
 Frame = -3

Query: 461 MSCQTWQLDELEVEPLEIREVLRCIVHTIMFHRVLGLVRPKDTDSELFEITYVKCGDEEL 282
           M+C+ + L EL+VEP +IREVLRCI+HT+MF+R LGLVRP+D DSELF++TYV+CGD   
Sbjct: 1   MNCEMFHLRELDVEPYQIREVLRCILHTVMFNRALGLVRPRDVDSELFDLTYVQCGDLTF 60

Query: 281 ERKIEEKIDQLIIWIEKHPNKKISV 207
           E+K+EEKIDQLI W+EKHPNKKI+V
Sbjct: 61  EKKMEEKIDQLIAWVEKHPNKKITV 85


>gb|ADE75727.1| unknown [Picea sitchensis]
          Length = 218

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/82 (74%), Positives = 71/82 (86%)
 Frame = -3

Query: 461 MSCQTWQLDELEVEPLEIREVLRCIVHTIMFHRVLGLVRPKDTDSELFEITYVKCGDEEL 282
           M+C+ + L+EL VE  +IREVLRCI+HTI FHR LGLVRPKD DSELFEITYV+CGD EL
Sbjct: 1   MNCEVFNLNELGVEHFQIREVLRCILHTIAFHRALGLVRPKDVDSELFEITYVQCGDLEL 60

Query: 281 ERKIEEKIDQLIIWIEKHPNKK 216
           E+KIEEKIDQ + W+EKHPNKK
Sbjct: 61  EKKIEEKIDQFVSWVEKHPNKK 82


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