BLASTX nr result

ID: Dioscorea21_contig00030399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030399
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbo...   166   2e-39
gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbo...   166   2e-39
ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   155   3e-36
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              155   3e-36
sp|Q6AWY6.2|GRF3_ORYSJ RecName: Full=Growth-regulating factor 3;...   144   6e-33

>gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbocastanum]
          Length = 445

 Score =  166 bits (420), Expect = 2e-39
 Identities = 70/89 (78%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  GWRPPFTAAQWQELEHQALIFKYMMAGVPVPQELLIPIRRSFEALSSRYYQHPALGYC-Y 191
           G+RPPFTA QWQELEHQA+I+KY++AG+PVP +L++PIRRSFEA+S+R++ HP+LGYC Y
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 192 YGKKLDPEPGRCRRTDGKKWRCSKDAYPD 278
           YGKK DPEPGRCRRTDGKKWRCSKDAYPD
Sbjct: 86  YGKKFDPEPGRCRRTDGKKWRCSKDAYPD 114


>gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbocastanum]
          Length = 552

 Score =  166 bits (420), Expect = 2e-39
 Identities = 70/89 (78%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  GWRPPFTAAQWQELEHQALIFKYMMAGVPVPQELLIPIRRSFEALSSRYYQHPALGYC-Y 191
           G+RPPFTA QWQELEHQA+I+KY++AG+PVP +L++PIRRSFEA+S+R++ HP+LGYC Y
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 192 YGKKLDPEPGRCRRTDGKKWRCSKDAYPD 278
           YGKK DPEPGRCRRTDGKKWRCSKDAYPD
Sbjct: 86  YGKKFDPEPGRCRRTDGKKWRCSKDAYPD 114


>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  155 bits (392), Expect = 3e-36
 Identities = 65/85 (76%), Positives = 80/85 (94%), Gaps = 1/85 (1%)
 Frame = +3

Query: 27  PFTAAQWQELEHQALIFKYMMAGVPVPQELLIPIRRSFEALSSRYYQHPALGYC-YYGKK 203
           PFT +QWQELEHQALIFKY+MAG+PVP +L++PI++SFE++SSR++ HP +GYC +YGKK
Sbjct: 23  PFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSSRFFHHPTMGYCSFYGKK 82

Query: 204 LDPEPGRCRRTDGKKWRCSKDAYPD 278
           +DPEPGRCRRTDGKKWRCSKDAYPD
Sbjct: 83  VDPEPGRCRRTDGKKWRCSKDAYPD 107


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  155 bits (392), Expect = 3e-36
 Identities = 65/85 (76%), Positives = 80/85 (94%), Gaps = 1/85 (1%)
 Frame = +3

Query: 27  PFTAAQWQELEHQALIFKYMMAGVPVPQELLIPIRRSFEALSSRYYQHPALGYC-YYGKK 203
           PFT +QWQELEHQALIFKY+MAG+PVP +L++PI++SFE++SSR++ HP +GYC +YGKK
Sbjct: 66  PFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSSRFFHHPTMGYCSFYGKK 125

Query: 204 LDPEPGRCRRTDGKKWRCSKDAYPD 278
           +DPEPGRCRRTDGKKWRCSKDAYPD
Sbjct: 126 VDPEPGRCRRTDGKKWRCSKDAYPD 150


>sp|Q6AWY6.2|GRF3_ORYSJ RecName: Full=Growth-regulating factor 3; Short=OsGRF3; AltName:
           Full=Transcription activator GRF3
           gi|38345778|emb|CAD41819.2| OSJNBa0083N12.16 [Oryza
           sativa Japonica Group] gi|218195498|gb|EEC77925.1|
           hypothetical protein OsI_17259 [Oryza sativa Indica
           Group] gi|222629484|gb|EEE61616.1| hypothetical protein
           OsJ_16036 [Oryza sativa Japonica Group]
          Length = 387

 Score =  144 bits (364), Expect = 6e-33
 Identities = 64/86 (74%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
 Frame = +3

Query: 24  PPFTAAQWQELEHQALIFKYMMAGVPVPQELLIPIRRSFEALSSRYYQHPALGY-CYYGK 200
           PPFTAAQ++ELE QALI+KY++AGVPVP +LL+PIRR  ++L+SR+Y HP LGY  Y+GK
Sbjct: 52  PPFTAAQYEELEQQALIYKYLVAGVPVPADLLLPIRRGLDSLASRFYHHPVLGYGSYFGK 111

Query: 201 KLDPEPGRCRRTDGKKWRCSKDAYPD 278
           KLDPEPGRCRRTDGKKWRCSK+A PD
Sbjct: 112 KLDPEPGRCRRTDGKKWRCSKEAAPD 137


Top