BLASTX nr result
ID: Dioscorea21_contig00030391
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030391 (620 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor... 241 8e-62 emb|CBI36976.3| unnamed protein product [Vitis vinifera] 240 1e-61 ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 240 1e-61 ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor... 239 3e-61 ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor... 239 3e-61 >ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Cucumis sativus] gi|449515243|ref|XP_004164659.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Cucumis sativus] Length = 732 Score = 241 bits (615), Expect = 8e-62 Identities = 119/207 (57%), Positives = 149/207 (71%), Gaps = 1/207 (0%) Frame = -2 Query: 619 YTKK-FLEACQPHASPEILRANXXXXXXXXXXXGISDMLHFDFINPPAVDMMTSAIETLN 443 YT+K F QP PEILR+N GI D++HFDF++PPA + + A+E LN Sbjct: 419 YTEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 478 Query: 442 CLGALDGDGNLTSIGELMSEFPLDPHMSKMILCSPEFKCSAEILSITSMLSVPHCFFQPR 263 LGALD DGNLT +GE+MSEFPLDP MSKM++ SPEFKCS EILS+++MLSVP+CF +PR Sbjct: 479 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSVSAMLSVPNCFVRPR 538 Query: 262 EKHHDADEAKAKFSHAKGDHLTLLTLYQAYKKHNGSSAWCEENYVNEAALKSADNARFHL 83 E ADEAKA+F H GDHLTLL +Y AYK++N +WC EN++N A+K+ADN R L Sbjct: 539 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQL 598 Query: 82 ESIMRRLNIKLCSTDPSNCDYDNNIRK 2 IM R N+KLCSTD +N +Y NIRK Sbjct: 599 VRIMSRFNLKLCSTDFNNREYYVNIRK 625 >emb|CBI36976.3| unnamed protein product [Vitis vinifera] Length = 687 Score = 240 bits (613), Expect = 1e-61 Identities = 121/207 (58%), Positives = 149/207 (71%), Gaps = 1/207 (0%) Frame = -2 Query: 619 YTKK-FLEACQPHASPEILRANXXXXXXXXXXXGISDMLHFDFINPPAVDMMTSAIETLN 443 YT+K F QP PEILR+N GI D++HFDF++PPA + + A+E LN Sbjct: 374 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 433 Query: 442 CLGALDGDGNLTSIGELMSEFPLDPHMSKMILCSPEFKCSAEILSITSMLSVPHCFFQPR 263 LGALD DGNLT +GE+MSEFPLDP MSKM++ SPEF CS EILSI++MLSVP+CF +PR Sbjct: 434 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPR 493 Query: 262 EKHHDADEAKAKFSHAKGDHLTLLTLYQAYKKHNGSSAWCEENYVNEAALKSADNARFHL 83 E ADEAKA+F H GDHLTLL +Y AYK++N +WC EN+VN+ ALK+ADN R L Sbjct: 494 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNQRALKAADNVRQQL 553 Query: 82 ESIMRRLNIKLCSTDPSNCDYDNNIRK 2 IM R N+KLCSTD ++ DY NIRK Sbjct: 554 VRIMARFNLKLCSTDFNSRDYYINIRK 580 >ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1| hypothetical protein VITISV_036050 [Vitis vinifera] Length = 728 Score = 240 bits (613), Expect = 1e-61 Identities = 121/207 (58%), Positives = 149/207 (71%), Gaps = 1/207 (0%) Frame = -2 Query: 619 YTKK-FLEACQPHASPEILRANXXXXXXXXXXXGISDMLHFDFINPPAVDMMTSAIETLN 443 YT+K F QP PEILR+N GI D++HFDF++PPA + + A+E LN Sbjct: 415 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 474 Query: 442 CLGALDGDGNLTSIGELMSEFPLDPHMSKMILCSPEFKCSAEILSITSMLSVPHCFFQPR 263 LGALD DGNLT +GE+MSEFPLDP MSKM++ SPEF CS EILSI++MLSVP+CF +PR Sbjct: 475 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPR 534 Query: 262 EKHHDADEAKAKFSHAKGDHLTLLTLYQAYKKHNGSSAWCEENYVNEAALKSADNARFHL 83 E ADEAKA+F H GDHLTLL +Y AYK++N +WC EN+VN+ ALK+ADN R L Sbjct: 535 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNQRALKAADNVRQQL 594 Query: 82 ESIMRRLNIKLCSTDPSNCDYDNNIRK 2 IM R N+KLCSTD ++ DY NIRK Sbjct: 595 VRIMARFNLKLCSTDFNSRDYYINIRK 621 >ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like isoform 2 [Glycine max] Length = 713 Score = 239 bits (610), Expect = 3e-61 Identities = 120/207 (57%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Frame = -2 Query: 619 YTKK-FLEACQPHASPEILRANXXXXXXXXXXXGISDMLHFDFINPPAVDMMTSAIETLN 443 YT+K F QP PEILR+N GI D++HFDF++PPA + + A+E LN Sbjct: 400 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 459 Query: 442 CLGALDGDGNLTSIGELMSEFPLDPHMSKMILCSPEFKCSAEILSITSMLSVPHCFFQPR 263 LGALD DGNLT +GE+MSEFPLDP MSKM++ SPEF CS EILS+++MLSVP+CF +PR Sbjct: 460 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCFVRPR 519 Query: 262 EKHHDADEAKAKFSHAKGDHLTLLTLYQAYKKHNGSSAWCEENYVNEAALKSADNARFHL 83 E ADEAKA+F H GDHLTLL +Y AYK++N +WC +N+VN ALKSADN R L Sbjct: 520 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQL 579 Query: 82 ESIMRRLNIKLCSTDPSNCDYDNNIRK 2 IM R N+KLCSTD ++ DY NIRK Sbjct: 580 VRIMSRFNLKLCSTDFNSRDYYVNIRK 606 >ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like isoform 1 [Glycine max] Length = 721 Score = 239 bits (610), Expect = 3e-61 Identities = 120/207 (57%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Frame = -2 Query: 619 YTKK-FLEACQPHASPEILRANXXXXXXXXXXXGISDMLHFDFINPPAVDMMTSAIETLN 443 YT+K F QP PEILR+N GI D++HFDF++PPA + + A+E LN Sbjct: 408 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 467 Query: 442 CLGALDGDGNLTSIGELMSEFPLDPHMSKMILCSPEFKCSAEILSITSMLSVPHCFFQPR 263 LGALD DGNLT +GE+MSEFPLDP MSKM++ SPEF CS EILS+++MLSVP+CF +PR Sbjct: 468 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCFVRPR 527 Query: 262 EKHHDADEAKAKFSHAKGDHLTLLTLYQAYKKHNGSSAWCEENYVNEAALKSADNARFHL 83 E ADEAKA+F H GDHLTLL +Y AYK++N +WC +N+VN ALKSADN R L Sbjct: 528 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQL 587 Query: 82 ESIMRRLNIKLCSTDPSNCDYDNNIRK 2 IM R N+KLCSTD ++ DY NIRK Sbjct: 588 VRIMSRFNLKLCSTDFNSRDYYVNIRK 614