BLASTX nr result

ID: Dioscorea21_contig00030320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030320
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20532.1| unnamed protein product [Daucus carota]               222   2e-56
dbj|BAF36287.1| hypothetical protein [Ipomoea trifida]                215   3e-54
gb|AAS79612.1| putative tnp2 transposase [Ipomoea trifida]            215   3e-54
dbj|BAA85462.1| transposon-like ORF [Brassica rapa]                   203   1e-50
gb|ACG60682.1| transposon-like ORF [Brassica oleracea var. albog...   202   2e-50

>dbj|BAA20532.1| unnamed protein product [Daucus carota]
          Length = 520

 Score =  222 bits (566), Expect = 2e-56
 Identities = 102/163 (62%), Positives = 116/163 (71%)
 Frame = -2

Query: 490 DNKLVGSFYETKKFAAELGLPCEKIHCCINGCMIYWDNDIDRRSCKFCDHPRYKNRQRAS 311
           DN  + SFY TKK    LGLP   I CC+NGCMIYW+ DID  SCKFC  PRYK R   S
Sbjct: 194 DNTFLDSFYGTKKHMEGLGLPSIHIDCCVNGCMIYWNEDIDMESCKFCSKPRYKIRVNRS 253

Query: 310 PRGKIDIPYQKMYYFPLTPRLQRLYASEVTAKYMRWHDEHNKKDGVMCHPSDAEAWKHFD 131
            R +  +  Q+M YFPL PRLQRLYAS  TA +MRWH +H K+DGVM H SD+  W+ FD
Sbjct: 254 TRERKKVAVQRMIYFPLAPRLQRLYASPTTAAHMRWHADHYKEDGVMHHCSDSGEWRQFD 313

Query: 130 RTNPSFALEARNVRLGLCTDGFQPFGQSGKQYSCWPVIVTPYN 2
           R +P F+ E RNVRLGL  DGFQPFG SGKQYS WP+IVTPYN
Sbjct: 314 RAHPLFSSEVRNVRLGLSADGFQPFGSSGKQYSSWPIIVTPYN 356


>dbj|BAF36287.1| hypothetical protein [Ipomoea trifida]
          Length = 853

 Score =  215 bits (547), Expect = 3e-54
 Identities = 93/164 (56%), Positives = 121/164 (73%)
 Frame = -2

Query: 493 TDNKLVGSFYETKKFAAELGLPCEKIHCCINGCMIYWDNDIDRRSCKFCDHPRYKNRQRA 314
           +DN++   +Y+++K  ++LGL  EKI CCIN CM+Y+ +DI+ R CKFC  PR+K R   
Sbjct: 250 SDNRVPSRYYDSEKLISKLGLAHEKIDCCINSCMLYYKSDINDRQCKFCGEPRFKPRSPN 309

Query: 313 SPRGKIDIPYQKMYYFPLTPRLQRLYASEVTAKYMRWHDEHNKKDGVMCHPSDAEAWKHF 134
             RGK ++P ++M+Y PL PRLQRLYAS  +A++MRWH E+ ++ GVMCHPSD EAWKHF
Sbjct: 310 CTRGK-EVPKKRMHYLPLIPRLQRLYASPSSAEHMRWHYENRRQPGVMCHPSDGEAWKHF 368

Query: 133 DRTNPSFALEARNVRLGLCTDGFQPFGQSGKQYSCWPVIVTPYN 2
           D   P F  + RNVRLGLC DGF PFG + K YSCWPV+V PYN
Sbjct: 369 DSQYPDFGADPRNVRLGLCADGFSPFGLNAKSYSCWPVMVVPYN 412


>gb|AAS79612.1| putative tnp2 transposase [Ipomoea trifida]
          Length = 651

 Score =  215 bits (547), Expect = 3e-54
 Identities = 93/164 (56%), Positives = 121/164 (73%)
 Frame = -2

Query: 493 TDNKLVGSFYETKKFAAELGLPCEKIHCCINGCMIYWDNDIDRRSCKFCDHPRYKNRQRA 314
           +DN++   +Y+++K  ++LGL  EKI CCIN CM+Y+ +DI+ R CKFC  PR+K R   
Sbjct: 183 SDNRVPSRYYDSEKLISKLGLAHEKIDCCINSCMLYYKSDINDRQCKFCGEPRFKPRSPN 242

Query: 313 SPRGKIDIPYQKMYYFPLTPRLQRLYASEVTAKYMRWHDEHNKKDGVMCHPSDAEAWKHF 134
             RGK ++P ++M+Y PL PRLQRLYAS  +A++MRWH E+ ++ GVMCHPSD EAWKHF
Sbjct: 243 CTRGK-EVPKKRMHYLPLIPRLQRLYASPSSAEHMRWHYENRRQPGVMCHPSDGEAWKHF 301

Query: 133 DRTNPSFALEARNVRLGLCTDGFQPFGQSGKQYSCWPVIVTPYN 2
           D   P F  + RNVRLGLC DGF PFG + K YSCWPV+V PYN
Sbjct: 302 DSQYPDFGADPRNVRLGLCADGFSPFGLNAKSYSCWPVMVVPYN 345


>dbj|BAA85462.1| transposon-like ORF [Brassica rapa]
          Length = 703

 Score =  203 bits (517), Expect = 1e-50
 Identities = 92/163 (56%), Positives = 112/163 (68%)
 Frame = -2

Query: 490 DNKLVGSFYETKKFAAELGLPCEKIHCCINGCMIYWDNDIDRRSCKFCDHPRYKNRQRAS 311
           DN    S+YE +K    LGLP E I  CI+ CMIYW +D    +C+FC  PR+K + R  
Sbjct: 212 DNVSADSYYEIQKLVYSLGLPSEMIDVCIDNCMIYWGDDEKLEACRFCKKPRFKPQGRGL 271

Query: 310 PRGKIDIPYQKMYYFPLTPRLQRLYASEVTAKYMRWHDEHNKKDGVMCHPSDAEAWKHFD 131
            R    +PYQ+M+Y P+T RL+RLY SE TA  MRWH EH + DG M HPSDA AWKHF+
Sbjct: 272 NR----VPYQRMWYLPITDRLKRLYQSEQTAANMRWHAEHTQTDGEMTHPSDARAWKHFN 327

Query: 130 RTNPSFALEARNVRLGLCTDGFQPFGQSGKQYSCWPVIVTPYN 2
           + +P FA  +RNV LGLCTDGF PFG SG+QYS WPV +TPYN
Sbjct: 328 KVHPDFASNSRNVYLGLCTDGFNPFGMSGRQYSLWPVFLTPYN 370


>gb|ACG60682.1| transposon-like ORF [Brassica oleracea var. alboglabra]
          Length = 704

 Score =  202 bits (514), Expect = 2e-50
 Identities = 92/163 (56%), Positives = 111/163 (68%)
 Frame = -2

Query: 490 DNKLVGSFYETKKFAAELGLPCEKIHCCINGCMIYWDNDIDRRSCKFCDHPRYKNRQRAS 311
           DN    S+YE +K    LGLP E I  CI+ CMIYW +D     C+FC  PR+K + R  
Sbjct: 213 DNVSADSYYEIQKLVYSLGLPSEMIDVCIDNCMIYWRDDEKLEECRFCKKPRFKPQGR-- 270

Query: 310 PRGKIDIPYQKMYYFPLTPRLQRLYASEVTAKYMRWHDEHNKKDGVMCHPSDAEAWKHFD 131
             G+  +PYQ+M+Y P+T RL+RLY SE TA  MRWH EH + DG M HPSDA AWKHF+
Sbjct: 271 --GRNRVPYQRMWYLPITDRLKRLYQSEQTAGKMRWHAEHTQTDGEMTHPSDARAWKHFN 328

Query: 130 RTNPSFALEARNVRLGLCTDGFQPFGQSGKQYSCWPVIVTPYN 2
           + +P FA   RNV LGLCTDGF PFG SG+QYS WPV +TPYN
Sbjct: 329 KVHPDFASNIRNVYLGLCTDGFSPFGMSGRQYSLWPVFLTPYN 371


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