BLASTX nr result

ID: Dioscorea21_contig00030285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030285
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group] g...   133   1e-29
emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]   125   3e-27
ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CBI21510.3| unnamed protein product [Vitis vinifera]              121   5e-26

>ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/101 (67%), Positives = 82/101 (81%)
 Frame = +3

Query: 3   RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182
           RS LSAC +FG+VE+G Y   MA   +P DSGP VL+SNIYAS+G+W DA+K+R+GMD  
Sbjct: 691 RSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCA 750

Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLT 305
           GVVK+PGYSWIEVMKEVH FIARGR+H + D IYS+LD LT
Sbjct: 751 GVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELT 791


>ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
           gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like
           [Oryza sativa Japonica Group]
           gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like
           [Oryza sativa Japonica Group]
           gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa
           Japonica Group] gi|215686971|dbj|BAG90841.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/101 (62%), Positives = 74/101 (73%)
 Frame = +3

Query: 3   RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182
           RS LSAC +FG+ E+G Y A MA   +P DSGPYVLLSNIYASKG+W D   +R+ MD  
Sbjct: 697 RSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSS 756

Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLT 305
           G VK+ G SWIEV KEVH FI RGR+H + + IYSVLD LT
Sbjct: 757 GTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELT 797


>emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 3   RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182
           RS LSACR+ G+VELG Y A MA +T+P+DSG Y+LLSNI+ASKGMW D +KVR  MD  
Sbjct: 613 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 672

Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLTQ 308
            VVK+PG SWIEV  +V+VFIAR   H + D I SVLD L Q
Sbjct: 673 EVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQ 714


>ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Cucumis sativus] gi|449515698|ref|XP_004164885.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/101 (59%), Positives = 76/101 (75%)
 Frame = +3

Query: 3    RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182
            RS LSACR+FG+VEL  + A MA + +P DSG YV+LSNI+ASKGMW D +++R  MD  
Sbjct: 718  RSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVN 777

Query: 183  GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLT 305
            GVVK+PG SWIEV  EVH+F++R + H +TD IY  LD LT
Sbjct: 778  GVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELT 818


>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 3   RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182
           RS LSACR+ G+VELG Y A MA +T+P+DSG Y+LLSNI+ASKGMW D +KVR  MD  
Sbjct: 626 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 685

Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLTQ 308
            VVK+PG SWIEV  +V+VFIAR   H + D I SVLD L Q
Sbjct: 686 EVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQ 726


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