BLASTX nr result
ID: Dioscorea21_contig00030285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00030285 (308 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33 ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group] g... 133 1e-29 emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera] 125 3e-27 ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi... 124 6e-27 emb|CBI21510.3| unnamed protein product [Vitis vinifera] 121 5e-26 >ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like [Brachypodium distachyon] Length = 822 Score = 147 bits (370), Expect = 1e-33 Identities = 68/101 (67%), Positives = 82/101 (81%) Frame = +3 Query: 3 RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182 RS LSAC +FG+VE+G Y MA +P DSGP VL+SNIYAS+G+W DA+K+R+GMD Sbjct: 691 RSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCA 750 Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLT 305 GVVK+PGYSWIEVMKEVH FIARGR+H + D IYS+LD LT Sbjct: 751 GVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELT 791 >ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group] gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group] gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group] gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group] gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group] Length = 819 Score = 133 bits (335), Expect = 1e-29 Identities = 63/101 (62%), Positives = 74/101 (73%) Frame = +3 Query: 3 RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182 RS LSAC +FG+ E+G Y A MA +P DSGPYVLLSNIYASKG+W D +R+ MD Sbjct: 697 RSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSS 756 Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLT 305 G VK+ G SWIEV KEVH FI RGR+H + + IYSVLD LT Sbjct: 757 GTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELT 797 >emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera] Length = 732 Score = 125 bits (315), Expect = 3e-27 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 3 RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182 RS LSACR+ G+VELG Y A MA +T+P+DSG Y+LLSNI+ASKGMW D +KVR MD Sbjct: 613 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 672 Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLTQ 308 VVK+PG SWIEV +V+VFIAR H + D I SVLD L Q Sbjct: 673 EVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQ 714 >ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like [Cucumis sativus] gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like [Cucumis sativus] Length = 837 Score = 124 bits (312), Expect = 6e-27 Identities = 60/101 (59%), Positives = 76/101 (75%) Frame = +3 Query: 3 RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182 RS LSACR+FG+VEL + A MA + +P DSG YV+LSNI+ASKGMW D +++R MD Sbjct: 718 RSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVN 777 Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLT 305 GVVK+PG SWIEV EVH+F++R + H +TD IY LD LT Sbjct: 778 GVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELT 818 >emb|CBI21510.3| unnamed protein product [Vitis vinifera] Length = 746 Score = 121 bits (304), Expect = 5e-26 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 3 RSFLSACRMFGDVELGNYGAMMATATNPRDSGPYVLLSNIYASKGMWVDAEKVRKGMDRI 182 RS LSACR+ G+VELG Y A MA +T+P+DSG Y+LLSNI+ASKGMW D +KVR MD Sbjct: 626 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 685 Query: 183 GVVKDPGYSWIEVMKEVHVFIARGRKHIQTDTIYSVLDGLTQ 308 VVK+PG SWIEV +V+VFIAR H + D I SVLD L Q Sbjct: 686 EVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQ 726