BLASTX nr result

ID: Dioscorea21_contig00030244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030244
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327261.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_004138831.1| PREDICTED: uncharacterized protein LOC101221...   145   3e-33
ref|XP_002526811.1| protein with unknown function [Ricinus commu...   139   2e-31
ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arab...   125   4e-27
ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis tha...   125   5e-27

>ref|XP_002327261.1| predicted protein [Populus trichocarpa] gi|222835631|gb|EEE74066.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/103 (66%), Positives = 86/103 (83%)
 Frame = -1

Query: 311 ISTLEYRNESDPDVSPYVHDRKLEVVQVALTKDAVDINNLLLDAIQPFVARLCAIGVLYN 132
           IS LEYRNESDPDV PYVHDRK+E+++VAL K+AVDIN  LL+ I+P+VARL  +G+L N
Sbjct: 177 ISALEYRNESDPDVIPYVHDRKIELIEVALGKEAVDINKRLLEVIRPYVARLSTLGLLQN 236

Query: 131 RDFTMLSPCELLNSRDKFRQAPPPNLPQAKFGEVEGCFAVLIT 3
           RD+  LSP +LLNSRDKFR+APP +LPQ ++GE+E CF  LIT
Sbjct: 237 RDYQTLSPPDLLNSRDKFRRAPPLDLPQNRYGEIEACFGGLIT 279


>ref|XP_004138831.1| PREDICTED: uncharacterized protein LOC101221910 [Cucumis sativus]
          Length = 1384

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/103 (66%), Positives = 88/103 (85%)
 Frame = -1

Query: 311 ISTLEYRNESDPDVSPYVHDRKLEVVQVALTKDAVDINNLLLDAIQPFVARLCAIGVLYN 132
           ISTL+YR+ESD DVSPYVHDRK+E++QVA+ +DAV+I+N LL+ ++PFVA+L +IG+L N
Sbjct: 315 ISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQN 374

Query: 131 RDFTMLSPCELLNSRDKFRQAPPPNLPQAKFGEVEGCFAVLIT 3
           RD+  LSPC+LLNSRDKFRQAPPP  P  K+ +VEG F VLIT
Sbjct: 375 RDYRTLSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLIT 417


>ref|XP_002526811.1| protein with unknown function [Ricinus communis]
           gi|223533815|gb|EEF35546.1| protein with unknown
           function [Ricinus communis]
          Length = 1351

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/103 (66%), Positives = 82/103 (79%)
 Frame = -1

Query: 311 ISTLEYRNESDPDVSPYVHDRKLEVVQVALTKDAVDINNLLLDAIQPFVARLCAIGVLYN 132
           ISTLEYRNE D DV PYVH+RK+E+++VAL KDAVDIN  LL  I P+VARL A+G+L N
Sbjct: 285 ISTLEYRNEGDADVVPYVHNRKIELIEVALGKDAVDINKQLLAVIHPYVARLSAVGLLQN 344

Query: 131 RDFTMLSPCELLNSRDKFRQAPPPNLPQAKFGEVEGCFAVLIT 3
           RD+  + P +LLNSRDKFR+APP  LPQ K+GE+E  FA LIT
Sbjct: 345 RDYKTVCPPDLLNSRDKFRRAPPSELPQNKYGEIEAYFAGLIT 387


>ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arabidopsis lyrata subsp.
           lyrata] gi|297337031|gb|EFH67448.1| hypothetical protein
           ARALYDRAFT_473682 [Arabidopsis lyrata subsp. lyrata]
          Length = 1321

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/103 (60%), Positives = 74/103 (71%)
 Frame = -1

Query: 311 ISTLEYRNESDPDVSPYVHDRKLEVVQVALTKDAVDINNLLLDAIQPFVARLCAIGVLYN 132
           ISTLEYRNESD DV PYVHDRKLE+++V L +DA D++  L D I+P+  RL   GV  N
Sbjct: 298 ISTLEYRNESDHDVCPYVHDRKLELIEVPLGQDADDVSKRLFDVIRPYAVRLKNFGVNLN 357

Query: 131 RDFTMLSPCELLNSRDKFRQAPPPNLPQAKFGEVEGCFAVLIT 3
           RD   LSP E+L +RDKFRQAP P LP    G+VE CF+ LIT
Sbjct: 358 RDLQTLSPHEVLMARDKFRQAPLPGLPHVNHGDVESCFSALIT 400


>ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis thaliana]
           gi|332193685|gb|AEE31806.1| fanconi anemia group M
           protein [Arabidopsis thaliana]
          Length = 1324

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/103 (61%), Positives = 73/103 (70%)
 Frame = -1

Query: 311 ISTLEYRNESDPDVSPYVHDRKLEVVQVALTKDAVDINNLLLDAIQPFVARLCAIGVLYN 132
           ISTLEYRNESD DV PYVHDRKLEV++V L +DA D++  L   I+P+  RL   GV  N
Sbjct: 288 ISTLEYRNESDHDVCPYVHDRKLEVIEVPLGQDADDVSKRLFHVIRPYAVRLKNFGVNLN 347

Query: 131 RDFTMLSPCELLNSRDKFRQAPPPNLPQAKFGEVEGCFAVLIT 3
           RD   LSP E+L +RDKFRQAP P LP    G+VE CFA LIT
Sbjct: 348 RDIQTLSPHEVLMARDKFRQAPLPGLPHVNHGDVESCFAALIT 390


Top