BLASTX nr result

ID: Dioscorea21_contig00030234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030234
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058800.1| Os07g0123800 [Oryza sativa Japonica Group] g...    83   2e-14
ref|XP_002440060.1| hypothetical protein SORBIDRAFT_09g025280 [S...    79   3e-13
ref|XP_002466388.1| hypothetical protein SORBIDRAFT_01g006870 [S...    75   4e-12
dbj|BAJ92926.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   2e-11
gb|AFW67493.1| hypothetical protein ZEAMMB73_124984 [Zea mays]         73   3e-11

>ref|NP_001058800.1| Os07g0123800 [Oryza sativa Japonica Group]
           gi|22093611|dbj|BAC06907.1| unknown protein [Oryza
           sativa Japonica Group] gi|50509396|dbj|BAD30962.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|50510188|dbj|BAD31297.1| unknown protein [Oryza
           sativa Japonica Group] gi|113610336|dbj|BAF20714.1|
           Os07g0123800 [Oryza sativa Japonica Group]
           gi|125557086|gb|EAZ02622.1| hypothetical protein
           OsI_24734 [Oryza sativa Indica Group]
          Length = 161

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 57/130 (43%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
 Frame = -2

Query: 438 APIRALSKARDFYVNSMTGCARKMPYGTG-AVGYPA-AFPXXXXXXXXXXXXXXS----- 280
           AP RAL +ARDFYV S+TGCA  +P       GYP  A P                    
Sbjct: 21  APRRALCRARDFYVRSITGCAGHLPPDAAFGYGYPTFAAPTTPTMSRNSSFASSRYSAGG 80

Query: 279 --DEDLRDLILASSLHLRATSVTTAALQNPVRRSQSVAVGRIDEDSPCEFQDEVKVGSNL 106
             D+D+R+L+ A+S  L A     AA    V RSQSVA+ RIDED PCEF      G  L
Sbjct: 81  GGDDDMRELVRAASQRLAAERAAAAAEPATVPRSQSVAMARIDEDRPCEF-----AGVGL 135

Query: 105 IFPRSVSLAV 76
           +FPRS S AV
Sbjct: 136 VFPRSQSCAV 145


>ref|XP_002440060.1| hypothetical protein SORBIDRAFT_09g025280 [Sorghum bicolor]
           gi|241945345|gb|EES18490.1| hypothetical protein
           SORBIDRAFT_09g025280 [Sorghum bicolor]
          Length = 174

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 58/135 (42%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
 Frame = -2

Query: 438 APIRALSKARDFYVNSMTGCARKMPYGTGAVGYPAAF-----PXXXXXXXXXXXXXXSDE 274
           AP+RALS+A D YV  MT CA +MP   GA G P  F                     +E
Sbjct: 21  APVRALSRACDSYVRQMTACAGRMPTPAGAYGGPGGFAPITMEAATFSSRSPRRGGDEEE 80

Query: 273 DLRDLILASSLHLRATSVTTAALQNPVRRSQSVAVGRIDEDSPCEF---QDE--VKVGSN 109
           DL +L  A SL   A SV  AA      RS+SVAVGRIDED+PCEF    D+  V+VG  
Sbjct: 81  DLNELFRALSLRQAAASV--AATTTVPVRSRSVAVGRIDEDAPCEFFGADDDVVVRVGGG 138

Query: 108 LIFPRSVSLAVREKR 64
               R+ S+AV   R
Sbjct: 139 PAVRRARSIAVGSAR 153


>ref|XP_002466388.1| hypothetical protein SORBIDRAFT_01g006870 [Sorghum bicolor]
           gi|241920242|gb|EER93386.1| hypothetical protein
           SORBIDRAFT_01g006870 [Sorghum bicolor]
          Length = 157

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
 Frame = -2

Query: 438 APIRALSKARDFYVNSMTGCARKMPYGTGAVGYPAAFP----XXXXXXXXXXXXXXSDED 271
           AP RAL +ARD YV  +TGCAR +P   G  GYP   P                  +DED
Sbjct: 13  APARALGRARDMYVRGLTGCARYVPADAG-FGYPVFVPAPLSRSHSADWRGGAGSGADED 71

Query: 270 LRDLILASSLHLRATSVTTAALQNPVRRSQSVA----VGRIDEDSPCEFQDEVKVGSNLI 103
           LR+L+ A+S   R      A LQ  V RSQS+A    + RIDED+PCEF  +   G   +
Sbjct: 72  LRELVRAAS--QRRVEQRRAELQ-AVARSQSMAASLSMARIDEDAPCEFGADAGDGPGAL 128

Query: 102 FPRSVS 85
           +PRS S
Sbjct: 129 YPRSQS 134


>dbj|BAJ92926.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 154

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/108 (43%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
 Frame = -2

Query: 438 APIRALSKARDFYVNSMTGCARKMPYGTGAVGYPAAFPXXXXXXXXXXXXXXSD---EDL 268
           AP RA  +ARDFYV S+TGCAR +P       YP   P               D   EDL
Sbjct: 14  APARAFGRARDFYVRSITGCARYVPADAAFGAYPVLVPAPLPRSQSCGSGAGWDGGEEDL 73

Query: 267 RDLILASSLHLRATSVTTAALQNPVRRSQSVA----VGRIDEDSPCEF 136
           R+LI A+S          AA  + V RSQSVA    + RIDED+PCEF
Sbjct: 74  RELIRAASQRRDGEQQRQAAHLHAVPRSQSVAGAASMARIDEDAPCEF 121


>gb|AFW67493.1| hypothetical protein ZEAMMB73_124984 [Zea mays]
          Length = 157

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 52/124 (41%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
 Frame = -2

Query: 438 APIRALSKARDFYVNSMTGCARKMPYGTGAVGYPAAF--PXXXXXXXXXXXXXXSDEDLR 265
           AP RAL +ARD YV  +TGCAR +P    A GYP     P              +DEDLR
Sbjct: 13  APARALGRARDLYVRGLTGCARYVP-SDAAFGYPVLVPAPPLSRSHSVDWGRGAADEDLR 71

Query: 264 DLILASSLHLRATSVTTAALQNPVRRSQSVA----VGRIDEDSPCEFQDEVKVGSNLIFP 97
           +L+ A+S   R      A L+  V RSQS+A    +GRIDED+PCE       G   + P
Sbjct: 72  ELVRAAS-QRRVVEQRRAELR-AVARSQSMAASLSMGRIDEDAPCELGAAAGDGPGALCP 129

Query: 96  RSVS 85
           RS S
Sbjct: 130 RSQS 133


Top