BLASTX nr result

ID: Dioscorea21_contig00030184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030184
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001140867.1| uncharacterized protein LOC100272943 [Zea ma...    80   1e-13
ref|NP_001060866.1| Os08g0118000 [Oryza sativa Japonica Group] g...    78   6e-13
ref|XP_002443777.1| hypothetical protein SORBIDRAFT_07g001760 [S...    78   6e-13
gb|EAZ05409.1| hypothetical protein OsI_27618 [Oryza sativa Indi...    77   2e-12
ref|XP_003536193.1| PREDICTED: uncharacterized protein LOC100776...    75   4e-12

>ref|NP_001140867.1| uncharacterized protein LOC100272943 [Zea mays]
           gi|194701518|gb|ACF84843.1| unknown [Zea mays]
           gi|195609746|gb|ACG26703.1| DNA-binding protein [Zea
           mays] gi|413921421|gb|AFW61353.1| DNA-binding protein
           [Zea mays]
          Length = 391

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/72 (59%), Positives = 47/72 (65%)
 Frame = -2

Query: 216 TYEGRFELLSLSGSFMPTDDGATRSRHGGISVSLASPDXXXXXXXXXXXXXXXXXXXXXX 37
           TYEGRFELLSLSGSFMPT++G TRSR GG+SVSLASPD                      
Sbjct: 232 TYEGRFELLSLSGSFMPTENGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVV 291

Query: 36  GSFIPGYQMEQK 1
           GSF+P YQMEQK
Sbjct: 292 GSFLPSYQMEQK 303


>ref|NP_001060866.1| Os08g0118000 [Oryza sativa Japonica Group]
           gi|42407899|dbj|BAD09039.1| putative AT-hook protein 1
           [Oryza sativa Japonica Group]
           gi|50725642|dbj|BAD33109.1| putative AT-hook protein 1
           [Oryza sativa Japonica Group]
           gi|113622835|dbj|BAF22780.1| Os08g0118000 [Oryza sativa
           Japonica Group] gi|119657404|tpd|FAA00301.1| TPA:
           AT-hook motif nuclear localized protein 1 [Oryza sativa
           Japonica Group] gi|125602001|gb|EAZ41326.1| hypothetical
           protein OsJ_25837 [Oryza sativa Japonica Group]
           gi|215687040|dbj|BAG90886.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 372

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/72 (58%), Positives = 46/72 (63%)
 Frame = -2

Query: 216 TYEGRFELLSLSGSFMPTDDGATRSRHGGISVSLASPDXXXXXXXXXXXXXXXXXXXXXX 37
           TYEGRFELLSLSGSFMPT++  TRSR GG+SVSLASPD                      
Sbjct: 221 TYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVV 280

Query: 36  GSFIPGYQMEQK 1
           GSF+P YQMEQK
Sbjct: 281 GSFLPSYQMEQK 292


>ref|XP_002443777.1| hypothetical protein SORBIDRAFT_07g001760 [Sorghum bicolor]
           gi|241940127|gb|EES13272.1| hypothetical protein
           SORBIDRAFT_07g001760 [Sorghum bicolor]
          Length = 363

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/72 (58%), Positives = 46/72 (63%)
 Frame = -2

Query: 216 TYEGRFELLSLSGSFMPTDDGATRSRHGGISVSLASPDXXXXXXXXXXXXXXXXXXXXXX 37
           TYEGRFELLSLSGSFMPT++  TRSR GG+SVSLASPD                      
Sbjct: 213 TYEGRFELLSLSGSFMPTENNGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVV 272

Query: 36  GSFIPGYQMEQK 1
           GSF+P YQMEQK
Sbjct: 273 GSFLPSYQMEQK 284


>gb|EAZ05409.1| hypothetical protein OsI_27618 [Oryza sativa Indica Group]
          Length = 372

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/72 (56%), Positives = 46/72 (63%)
 Frame = -2

Query: 216 TYEGRFELLSLSGSFMPTDDGATRSRHGGISVSLASPDXXXXXXXXXXXXXXXXXXXXXX 37
           TYEGRFELLSLSGSFMPT++  TRSR GG+SVSLASPD                      
Sbjct: 221 TYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVV 280

Query: 36  GSFIPGYQMEQK 1
           GSF+P YQ+EQK
Sbjct: 281 GSFLPSYQIEQK 292


>ref|XP_003536193.1| PREDICTED: uncharacterized protein LOC100776862 isoform 2 [Glycine
           max]
          Length = 330

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/72 (52%), Positives = 45/72 (62%)
 Frame = -2

Query: 216 TYEGRFELLSLSGSFMPTDDGATRSRHGGISVSLASPDXXXXXXXXXXXXXXXXXXXXXX 37
           TYEGRFE+LSLSGSFMPT++G TRSR GG+SVSLA PD                      
Sbjct: 177 TYEGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVV 236

Query: 36  GSFIPGYQMEQK 1
            SF+PG+Q+E K
Sbjct: 237 ASFLPGHQLEHK 248


Top