BLASTX nr result
ID: Dioscorea21_contig00030147
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00030147
(1213 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|2... 457 e-126
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 328 1e-87
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 327 5e-87
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 325 1e-86
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar... 325 2e-86
>ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|222851210|gb|EEE88757.1|
predicted protein [Populus trichocarpa]
Length = 594
Score = 457 bits (1176), Expect = e-126
Identities = 217/382 (56%), Positives = 292/382 (76%), Gaps = 1/382 (0%)
Frame = +1
Query: 70 DQPDSLRYAHQLFHSPHCPRTPFFYNSLIKSYSINGYPKTAFLLFCDMLL-HGVAEPDRY 246
D SL YA +LF + PR F Y ++IK+Y+ G P+ AF + ML P+ +
Sbjct: 77 DNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDF 136
Query: 247 TYTFVCNACSKAMLVFEGKQVHARLVKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDG 426
T+T+V +ACSK VFEGKQ HA+++K SWNSL+DFY +GE VRR+ D
Sbjct: 137 TFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDK 196
Query: 427 MKDPCIVSWNCLLDGYVKSGEIEDARKVFEEMPERDTVSWTTMLLGYVNEGMLDEACCLF 606
++ P +VSWNCL++GYVKSG++++AR++F+EMPERD VSWT ML+GY + G L EA CLF
Sbjct: 197 IEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLF 256
Query: 607 DEMPEKNMVSWSVMIKGFWRSGCYNEALDLFKEMQVLDIEIDKITLTTLLSACAGLGALD 786
DEMP++N+VSWS +IKG+ + GCY++AL+LFKEMQV +++D++ +TTLLSACA LGALD
Sbjct: 257 DEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALD 316
Query: 787 QGCWIHAFIDKHGVEVDAHLCTALVDMYAKCGRLDLARKVFQGFKKRKVFVWNAMLGGLA 966
QG W+H +IDKHG++VDAHL TAL+DMY+KCGR+D+A KVFQ +KVFVW++M+GGLA
Sbjct: 317 QGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLA 376
Query: 967 MHSLGLEAVELFSEMLRSGIRPNEITFICVLSACSHSGLVKDGLQIFHSMAEDYKIKPCV 1146
MHS G +A+ELF++M+ GI P+EIT+I +L+AC+HSGLV GLQIF+ M E+ K KP +
Sbjct: 377 MHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRM 436
Query: 1147 QHYGCLVDLLGRAGLFEEAKRV 1212
QHYGC+VDLLGRAGL +A RV
Sbjct: 437 QHYGCIVDLLGRAGLLHDAFRV 458
Score = 57.0 bits (136), Expect = 9e-06
Identities = 57/271 (21%), Positives = 119/271 (43%), Gaps = 9/271 (3%)
Frame = +1
Query: 142 YNSLIKSYSINGYPKTAFLLFCDMLLHGVAEPDRYTYTFVCNACSKAMLVFEGKQVHARL 321
+++LIK Y G A LF +M + V + D T + +AC++ + +G+ +H +
Sbjct: 267 WSALIKGYIQIGCYSKALELFKEMQVAKV-KMDEVIVTTLLSACARLGALDQGRWLHMYI 325
Query: 322 VKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDGMKDPCIVSWNCLLDGYVKSGEIEDA 501
K+ V +L+D Y G + ++ D + W+ ++ G E A
Sbjct: 326 DKHGIKVDAHLSTALIDMYSKCGR-IDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKA 384
Query: 502 RKVFEEMPE----RDTVSWTTMLLGYVNEGMLDEACCLFDEM-----PEKNMVSWSVMIK 654
++F +M E +++ +L + G++D +F+ M P+ M + ++
Sbjct: 385 IELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVD 444
Query: 655 GFWRSGCYNEALDLFKEMQVLDIEIDKITLTTLLSACAGLGALDQGCWIHAFIDKHGVEV 834
R+G ++A F+ ++ + ++ D LLSAC ++ G + + K +
Sbjct: 445 LLGRAGLLHDA---FRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQN 501
Query: 835 DAHLCTALVDMYAKCGRLDLARKVFQGFKKR 927
D + ++YA R D++ K+ + K R
Sbjct: 502 DMNY-VLFSNVYAAVNRWDISGKLRREMKVR 531
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like
[Vitis vinifera]
Length = 536
Score = 328 bits (842), Expect = 1e-87
Identities = 160/377 (42%), Positives = 246/377 (65%)
Frame = +1
Query: 82 SLRYAHQLFHSPHCPRTPFFYNSLIKSYSINGYPKTAFLLFCDMLLHGVAEPDRYTYTFV 261
++ YAH +F P + + +N++I++Y+ + P+ A +F ML H PD+YT+TF
Sbjct: 57 AIPYAHSIFSRIPNPNS-YMWNTIIRAYANSPTPEAALTIFHQML-HASVLPDKYTFTFA 114
Query: 262 CNACSKAMLVFEGKQVHARLVKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDGMKDPC 441
+C V EG+Q+H ++K G N+L+ Y + G + R +LD M +
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCG-CIEDARHLLDRMLERD 173
Query: 442 IVSWNCLLDGYVKSGEIEDARKVFEEMPERDTVSWTTMLLGYVNEGMLDEACCLFDEMPE 621
+VSWN LL Y + G +E A +F+EM ER+ SW M+ GYV G+L+EA +F E P
Sbjct: 174 VVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPV 233
Query: 622 KNMVSWSVMIKGFWRSGCYNEALDLFKEMQVLDIEIDKITLTTLLSACAGLGALDQGCWI 801
KN+VSW+ MI G+ +G ++E L LF++MQ ++ D TL ++LSACA +GAL QG W+
Sbjct: 234 KNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWV 293
Query: 802 HAFIDKHGVEVDAHLCTALVDMYAKCGRLDLARKVFQGFKKRKVFVWNAMLGGLAMHSLG 981
HA+IDK+G+ +D + TALVDMY+KCG ++ A +VF ++ + WN+++ GL+ H G
Sbjct: 294 HAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSG 353
Query: 982 LEAVELFSEMLRSGIRPNEITFICVLSACSHSGLVKDGLQIFHSMAEDYKIKPCVQHYGC 1161
A+++FSEML G +PNE+TF+CVLSACS +GL+ +G ++F+ M + I+P ++HYGC
Sbjct: 354 QHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGC 413
Query: 1162 LVDLLGRAGLFEEAKRV 1212
+VDLLGR GL EEA+ +
Sbjct: 414 MVDLLGRVGLLEEAEEL 430
Score = 86.7 bits (213), Expect = 1e-14
Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Frame = +1
Query: 136 FFYNSLIKSYSINGYPKTAFLLFCDMLLHGVAEPDRYTYTFVCNACSKAMLVFEGKQVHA 315
F N+LI Y+ G + A L ML E D ++ + +A ++ L+ ++
Sbjct: 144 FIQNTLIHLYASCGCIEDARHLLDRML-----ERDVVSWNALLSAYAERGLM----ELAC 194
Query: 316 RLVKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDGMKDPCIVSWNCLLDGYVKSGEIE 495
L + ESWN ++ Y+ +G + RR+ +VSWN ++ GY +G
Sbjct: 195 HLFDEMTERNVESWNFMISGYVGVGL-LEEARRVFGETPVKNVVSWNAMITGYSHAGRFS 253
Query: 496 DARKVFEEM------PERDTV----------------SW-----------------TTML 558
+ +FE+M P+ T+ W T ++
Sbjct: 254 EVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALV 313
Query: 559 LGYVNEGMLDEACCLFDEMPEKNMVSWSVMIKGFWRSGCYNEALDLFKEMQVLDIEIDKI 738
Y G +++A +F+ K++ +W+ +I G G AL +F EM V + +++
Sbjct: 314 DMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEV 373
Query: 739 TLTTLLSACAGLGALDQGC-WIHAFIDKHGVEVDAHLCTALVDMYAKCGRLDLARKVFQG 915
T +LSAC+ G LD+G + + HG++ +VD+ + G L+ A ++ Q
Sbjct: 374 TFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQK 433
Query: 916 F-KKRKVFVWNAMLGGLAMHSLGLEAVELFSEMLRSGIRPNEITFICVLSACSHSGLVKD 1092
+K VW ++LG H +E E ++ L +F+ + + + G KD
Sbjct: 434 MPQKEASVVWESLLGACRNHG-NVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKD 492
Query: 1093 GLQIFHSM 1116
+++ M
Sbjct: 493 VMEVRQKM 500
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 327 bits (837), Expect = 5e-87
Identities = 172/361 (47%), Positives = 240/361 (66%), Gaps = 2/361 (0%)
Frame = +1
Query: 136 FFYNSLIKSYSINGYPKTAFLLFCDMLLHGVAEPDRYTYTFVCNACSKAMLVFEGKQVHA 315
F +N +IK N P A LL+ +M++ P++YTY V ACS A +V EG QVHA
Sbjct: 103 FLWNCMIKVCIENNEPFKAILLYYEMMVAHF-RPNKYTYPAVLKACSDAGVVAEGVQVHA 161
Query: 316 RLVKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDGMKDPC-IVSWNCLLDGYVKSGEI 492
LVK+ G +S + Y + G V RRILD V WN ++DGY++ GE+
Sbjct: 162 HLVKHGLGGDGHILSSAIRMYASFGRLVE-ARRILDDKGGEVDAVCWNAMIDGYLRFGEV 220
Query: 493 EDARKVFEEMPERDTVS-WTTMLLGYVNEGMLDEACCLFDEMPEKNMVSWSVMIKGFWRS 669
E AR++FE MP+R +S W M+ G+ GM++ A FDEM E++ +SWS MI G+ +
Sbjct: 221 EAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQE 280
Query: 670 GCYNEALDLFKEMQVLDIEIDKITLTTLLSACAGLGALDQGCWIHAFIDKHGVEVDAHLC 849
GC+ EAL++F +MQ I K L ++LSACA LGALDQG WIH + ++ +++D L
Sbjct: 281 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 340
Query: 850 TALVDMYAKCGRLDLARKVFQGFKKRKVFVWNAMLGGLAMHSLGLEAVELFSEMLRSGIR 1029
T+LVDMYAKCGR+DLA +VF+ ++V WNAM+GGLAMH +A++LFS+M I
Sbjct: 341 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIN 397
Query: 1030 PNEITFICVLSACSHSGLVKDGLQIFHSMAEDYKIKPCVQHYGCLVDLLGRAGLFEEAKR 1209
PNEITF+ VL+AC+H GLV+ GL IF+SM ++Y ++P ++HYGC+VDLLGRAGL EA++
Sbjct: 398 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 457
Query: 1210 V 1212
V
Sbjct: 458 V 458
Score = 61.2 bits (147), Expect = 5e-07
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Frame = +1
Query: 802 HAFIDKHGVEVDAHLCTALVDMYAKCGR-----LDLARKVFQGFKKRKVFVWNAMLGGLA 966
HA I + G D+++ +LV YA + + +VF +K VF+WN M+
Sbjct: 54 HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCI 113
Query: 967 MHSLGLEAVELFSEMLRSGIRPNEITFICVLSACSHSGLVKDGLQI 1104
++ +A+ L+ EM+ + RPN+ T+ VL ACS +G+V +G+Q+
Sbjct: 114 ENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQV 159
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 325 bits (834), Expect = 1e-86
Identities = 171/361 (47%), Positives = 241/361 (66%), Gaps = 2/361 (0%)
Frame = +1
Query: 136 FFYNSLIKSYSINGYPKTAFLLFCDMLLHGVAEPDRYTYTFVCNACSKAMLVFEGKQVHA 315
F +N +IK N P A LL+ +M++ + P++YTY V ACS + +V EG QVHA
Sbjct: 104 FLWNCMIKVCIENNEPFKAILLYYEMVV-AHSRPNKYTYPAVLKACSDSGVVAEGVQVHA 162
Query: 316 RLVKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDGMKDPC-IVSWNCLLDGYVKSGEI 492
LVK+ G +S + Y + G V RRILD V WN ++DGY++ GE+
Sbjct: 163 HLVKHGLGGDGHILSSAIRMYASFGRLVE-ARRILDDKGGEVDAVCWNAMIDGYLRFGEV 221
Query: 493 EDARKVFEEMPERDTVS-WTTMLLGYVNEGMLDEACCLFDEMPEKNMVSWSVMIKGFWRS 669
E AR++FE MP+R +S W M+ G+ GM++ A FDEM E++ +SWS MI G+ +
Sbjct: 222 EAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQE 281
Query: 670 GCYNEALDLFKEMQVLDIEIDKITLTTLLSACAGLGALDQGCWIHAFIDKHGVEVDAHLC 849
GC+ EAL++F +MQ I K L ++LSACA LGALDQG WIH + ++ +++D L
Sbjct: 282 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 341
Query: 850 TALVDMYAKCGRLDLARKVFQGFKKRKVFVWNAMLGGLAMHSLGLEAVELFSEMLRSGIR 1029
T+LVDMYAKCGR+DLA +VF+ ++V WNAM+GGLAMH +A++LFS+M I
Sbjct: 342 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIY 398
Query: 1030 PNEITFICVLSACSHSGLVKDGLQIFHSMAEDYKIKPCVQHYGCLVDLLGRAGLFEEAKR 1209
PNEITF+ VL+AC+H GLV+ GL IF+SM ++Y ++P ++HYGC+VDLLGRAGL EA++
Sbjct: 399 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 458
Query: 1210 V 1212
V
Sbjct: 459 V 459
Score = 61.2 bits (147), Expect = 5e-07
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Frame = +1
Query: 802 HAFIDKHGVEVDAHLCTALVDMYAKCGR-----LDLARKVFQGFKKRKVFVWNAMLGGLA 966
HA I + G D+++ +LV YA + + +VF +K VF+WN M+
Sbjct: 55 HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCI 114
Query: 967 MHSLGLEAVELFSEMLRSGIRPNEITFICVLSACSHSGLVKDGLQI 1104
++ +A+ L+ EM+ + RPN+ T+ VL ACS SG+V +G+Q+
Sbjct: 115 ENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQV 160
>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18840 gi|5738365|emb|CAA16741.2| putative protein
[Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 325 bits (832), Expect = 2e-86
Identities = 162/383 (42%), Positives = 248/383 (64%), Gaps = 3/383 (0%)
Frame = +1
Query: 73 QPDSLRYAHQLFHSPHCPRTPFFYNSLIKSYSINGYPKTAFLLFCDMLLHGVAEPDRYTY 252
+P ++ YAH + + P F +NS+I++Y+ + P+ A +F +MLL G PD+Y++
Sbjct: 86 EPKTVSYAHSILNRIGSPNG-FTHNSVIRAYANSSTPEVALTVFREMLL-GPVFPDKYSF 143
Query: 253 TFVCNACSKAMLVFEGKQVHARLVKNANGVSPESWNSLMDFYLNIGEDVRRVRRILDGMK 432
TFV AC+ EG+Q+H +K+ N+L++ Y G R++LD M
Sbjct: 144 TFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGY-FEIARKVLDRMP 202
Query: 433 DPCIVSWNCLLDGYVKSGEIEDARKVFEEMPERDTVSWTTMLLGYVNEGMLDEACCLFDE 612
VSWN LL Y++ G +++AR +F+EM ER+ SW M+ GY G++ EA +FD
Sbjct: 203 VRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDS 262
Query: 613 MPEKNMVSWSVMIKGFWRSGCYNEALDLFKEMQVLDIEIDK---ITLTTLLSACAGLGAL 783
MP +++VSW+ M+ + GCYNE L++F +M LD +K TL ++LSACA LG+L
Sbjct: 263 MPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM--LDDSTEKPDGFTLVSVLSACASLGSL 320
Query: 784 DQGCWIHAFIDKHGVEVDAHLCTALVDMYAKCGRLDLARKVFQGFKKRKVFVWNAMLGGL 963
QG W+H +IDKHG+E++ L TALVDMY+KCG++D A +VF+ KR V WN+++ L
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDL 380
Query: 964 AMHSLGLEAVELFSEMLRSGIRPNEITFICVLSACSHSGLVKDGLQIFHSMAEDYKIKPC 1143
++H LG +A+E+FSEM+ G +PN ITFI VLSAC+H G++ ++F M+ Y+++P
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPT 440
Query: 1144 VQHYGCLVDLLGRAGLFEEAKRV 1212
++HYGC+VDLLGR G EEA+ +
Sbjct: 441 IEHYGCMVDLLGRMGKIEEAEEL 463