BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030132
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172636.1| pentatricopeptide repeat-containing protein [Ar...   130   8e-29
ref|XP_002889890.1| pentatricopeptide repeat-containing protein ...   130   1e-28
ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002518478.1| pentatricopeptide repeat-containing protein,...   120   1e-25
gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu...   118   6e-25

>ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g11710, mitochondrial; Flags: Precursor
           gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14
           [Arabidopsis thaliana] gi|22655109|gb|AAM98145.1|
           putative salt-inducible protein [Arabidopsis thaliana]
           gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis
           thaliana] gi|332190652|gb|AEE28773.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  130 bits (328), Expect = 8e-29
 Identities = 59/104 (56%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           ++ EM S GYVENV TFNL IY+ C++ ++ EA SV YRMLK G  PN VSFNM++DG C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           + G++  ALQL+ K+ ++SG  V PNAVT+NS++NG CKAG+ D
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLD 308


>ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335732|gb|EFH66149.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/104 (56%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           ++ EM S GYVENV TFNL IY+ C++ ++ EA SV YRMLK G  PN VSFNM++DG C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDGAC 264

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           + G++  ALQL+ K+ ++SG  V PNAVT+NS++NG CKAG+ D
Sbjct: 265 KTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLD 308


>ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|222859594|gb|EEE97141.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  129 bits (325), Expect = 2e-28
 Identities = 54/101 (53%), Positives = 83/101 (82%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           ++ EM+S+GY+ENV TFN+ ++ALC+DC++ EA SV YR+LK G  PN V+FNM+VDG C
Sbjct: 225 VYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGAC 284

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAG 303
           + G++DLAL+LV+K+ ++S   ++PN+VT+NS+++G CK G
Sbjct: 285 KMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIG 325



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/102 (35%), Positives = 59/102 (57%)
 Frame = +1

Query: 7   DEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCCRN 186
           +++L    +E+  + N+ I  LC+      A  ++ RM   G VP+ V+F  L+DG C+ 
Sbjct: 440 NQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKE 499

Query: 187 GEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           G ++ A+Q+  K  +V G   +PN + +NSI+NGLCK G  D
Sbjct: 500 GNIESAVQVYDK--MVKGEE-KPNLLVYNSIINGLCKDGLVD 538



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/104 (31%), Positives = 54/104 (51%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           L   M   G V +V+TF   I   C++  +  A  V  +M+K    PN + +N +++G C
Sbjct: 473 LLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLC 532

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           ++G VD+A  LV     V  R    + +T+N+++NG    GK D
Sbjct: 533 KDGLVDVARSLVD----VLQRMGLVDTITYNTLINGYFNCGKFD 572


>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/101 (54%), Positives = 80/101 (79%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           ++ EM+S+GY+ENV TFNL IYAL ++ R++EA SV+YR LK G  PN V+FNM++DG  
Sbjct: 150 MYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAG 303
           + G +DLAL+LV+K+ ++SG  V+P++VT+NS +NG CK G
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIG 250



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/100 (32%), Positives = 57/100 (57%)
 Frame = +1

Query: 13  MLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCCRNGE 192
           +L    V +  + N+ I  LCR   +  A  ++  M   G VP+ V+F  L+D  C++G+
Sbjct: 367 ILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGK 426

Query: 193 VDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           V+ A+Q+ +K+ + +G +  PN + +NS++NG  K G  D
Sbjct: 427 VENAIQVYEKM-IKTGEK--PNLLIYNSVINGFAKEGSFD 463



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/104 (31%), Positives = 54/104 (51%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           L   M   G V +V+TF   I   C+D +V  A  V  +M+K G  PN + +N +++G  
Sbjct: 398 LLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFA 457

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           + G  D A+ L+  +     R    + VT+N++++G C  GK D
Sbjct: 458 KEGSFDPAILLIDTLR----RMGLFDVVTYNTLIHGYCNCGKID 497


>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/99 (54%), Positives = 74/99 (74%)
 Frame = +1

Query: 1   LFDEMLSFGYVENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCC 180
           ++ EM++ GY ENV TFNL IYALC++C++LEA SV+Y MLK+   PN VSFNM++D   
Sbjct: 201 MYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKAS 260

Query: 181 RNGEVDLALQLVKKISLVSGRRVEPNAVTFNSILNGLCK 297
           + GE+DLAL+L +   ++SG  V PN VT+N I+NG CK
Sbjct: 261 KMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCK 299



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 51/94 (54%)
 Frame = +1

Query: 31  VENVITFNLAIYALCRDCRVLEAFSVMYRMLKLGFVPNAVSFNMLVDGCCRNGEVDLALQ 210
           V++  T N+ I  + +   +  A  ++  M+  G  P+ V++  LV G C+ G+++ A+Q
Sbjct: 424 VKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQ 483

Query: 211 LVKKISLVSGRRVEPNAVTFNSILNGLCKAGKPD 312
           +  K     G+    N V +NSIL+GLCK G  D
Sbjct: 484 IYDKTVKADGKS---NLVVYNSILDGLCKQGSID 514