BLASTX nr result

ID: Dioscorea21_contig00030130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030130
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinu...   191   4e-47
ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   190   1e-46
ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248...   189   3e-46
emb|CBI24230.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_002297742.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46

>ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223538286|gb|EEF39893.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1042

 Score =  191 bits (486), Expect = 4e-47
 Identities = 82/114 (71%), Positives = 96/114 (84%)
 Frame = -1

Query: 343 GDNDDRNAPTLVEALKDKQVKGVVCGSTFTAVICLHKWVSSVDQSICSGCRLPFGLRRKR 164
           GDN DRN PT+V+ L+DKQV+ V CGS FTA+ICLHKWVSS D S+CSGC  PFG RRKR
Sbjct: 611 GDNKDRNQPTVVDFLRDKQVRAVACGSNFTAIICLHKWVSSADHSVCSGCHNPFGFRRKR 670

Query: 163 HNCYNCGLVFCKVCSSRKSVKASLAPNMNKPYRVCDECYTKLKKSTRSGMIQQL 2
           HNCYNCGLVFCK CSSRKS+KASLAPNMNKP+RVCD+C+ KLKK+   G + ++
Sbjct: 671 HNCYNCGLVFCKACSSRKSLKASLAPNMNKPHRVCDDCFNKLKKAAEPGTVPRI 724


>ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  190 bits (482), Expect = 1e-46
 Identities = 82/113 (72%), Positives = 93/113 (82%)
 Frame = -1

Query: 343 GDNDDRNAPTLVEALKDKQVKGVVCGSTFTAVICLHKWVSSVDQSICSGCRLPFGLRRKR 164
           GDN+ RN PT+V+ LKDKQVK V CGS FT VIC+HKWVSS D S+CSGC  PFG RRKR
Sbjct: 603 GDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSADHSVCSGCHNPFGFRRKR 662

Query: 163 HNCYNCGLVFCKVCSSRKSVKASLAPNMNKPYRVCDECYTKLKKSTRSGMIQQ 5
           HNCYNCGLVFCK CSS+KS+KASLAPN+NKPYRVCD+C+ KLKK   S  + Q
Sbjct: 663 HNCYNCGLVFCKACSSKKSLKASLAPNLNKPYRVCDDCFNKLKKIMESSSVSQ 715


>ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  189 bits (479), Expect = 3e-46
 Identities = 82/113 (72%), Positives = 95/113 (84%)
 Frame = -1

Query: 343 GDNDDRNAPTLVEALKDKQVKGVVCGSTFTAVICLHKWVSSVDQSICSGCRLPFGLRRKR 164
           GD DDRN+PTLVEALKDKQVK + CG+ FTA ICLHKWVS VDQS+CSGCRLPF  +RKR
Sbjct: 622 GDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKRKR 681

Query: 163 HNCYNCGLVFCKVCSSRKSVKASLAPNMNKPYRVCDECYTKLKKSTRSGMIQQ 5
           HNCYNCGLVFC  CSS+KS+KAS+APN NKPYRVCD C++KL+K+  +    Q
Sbjct: 682 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQ 734


>emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  189 bits (479), Expect = 3e-46
 Identities = 82/113 (72%), Positives = 95/113 (84%)
 Frame = -1

Query: 343 GDNDDRNAPTLVEALKDKQVKGVVCGSTFTAVICLHKWVSSVDQSICSGCRLPFGLRRKR 164
           GD DDRN+PTLVEALKDKQVK + CG+ FTA ICLHKWVS VDQS+CSGCRLPF  +RKR
Sbjct: 468 GDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKRKR 527

Query: 163 HNCYNCGLVFCKVCSSRKSVKASLAPNMNKPYRVCDECYTKLKKSTRSGMIQQ 5
           HNCYNCGLVFC  CSS+KS+KAS+APN NKPYRVCD C++KL+K+  +    Q
Sbjct: 528 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQ 580


>ref|XP_002297742.1| predicted protein [Populus trichocarpa] gi|222845000|gb|EEE82547.1|
           predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  189 bits (479), Expect = 3e-46
 Identities = 79/106 (74%), Positives = 96/106 (90%)
 Frame = -1

Query: 343 GDNDDRNAPTLVEALKDKQVKGVVCGSTFTAVICLHKWVSSVDQSICSGCRLPFGLRRKR 164
           GD DDRN P++VEALKDKQVKG++CG++FTA ICLHKWVS +DQS+CSGCRLPF  +RKR
Sbjct: 581 GDTDDRNFPSIVEALKDKQVKGIICGTSFTAAICLHKWVSGIDQSMCSGCRLPFNFKRKR 640

Query: 163 HNCYNCGLVFCKVCSSRKSVKASLAPNMNKPYRVCDECYTKLKKST 26
           HNCYNCGLVFC  CSS+KS+KAS+APN NKPYRVCD C++K+++ST
Sbjct: 641 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDYCFSKIRRST 686


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