BLASTX nr result

ID: Dioscorea21_contig00030078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030078
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519880.1| ankyrin repeat-containing protein, putative ...    60   2e-07
ref|XP_002304382.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|NP_193650.2| ankyrin repeat-containing protein [Arabidopsis ...    59   4e-07
gb|AFK49276.1| unknown [Lotus japonicus]                               57   1e-06
ref|XP_003612598.1| Ankyrin repeat domain-containing protein [Me...    57   1e-06

>ref|XP_002519880.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223540926|gb|EEF42484.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 249

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/72 (44%), Positives = 46/72 (63%)
 Frame = -1

Query: 301 KDRTSKRSDAGSEPDLHAAARTGDLHAVESICNSNPLSINSRDRHSRTRVMCC**WKHQS 122
           + R+      G E +LHAAAR+GDL+AV+SI + NPL++NSRD+HSRT +         S
Sbjct: 3   RGRSGGGGGGGGEGELHAAARSGDLNAVQSILSLNPLAVNSRDKHSRTPLHLA----AWS 58

Query: 121 GHSFKLNVLNNK 86
           GH   +N L+ +
Sbjct: 59  GHVHVVNYLSQQ 70


>ref|XP_002304382.1| predicted protein [Populus trichocarpa] gi|222841814|gb|EEE79361.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -1

Query: 271 GSEPDLHAAARTGDLHAVESICNSNPLSINSRDRHSRT 158
           G + +LHAAAR+GD+ AVESI +SNPL+INSRD+HSRT
Sbjct: 11  GGDTELHAAARSGDMKAVESIVSSNPLAINSRDKHSRT 48


>ref|NP_193650.2| ankyrin repeat-containing protein [Arabidopsis thaliana]
           gi|26452016|dbj|BAC43098.1| putative ankyrin
           [Arabidopsis thaliana] gi|332658749|gb|AEE84149.1|
           ankyrin repeat-containing protein [Arabidopsis thaliana]
          Length = 243

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -1

Query: 271 GSEPDLHAAARTGDLHAVESICNSNPLSINSRDRHSRT 158
           G+  DLH+AAR+GDL AV+SI +SNPL++NSRD+HSRT
Sbjct: 15  GASADLHSAARSGDLAAVQSIISSNPLAVNSRDKHSRT 52


>gb|AFK49276.1| unknown [Lotus japonicus]
          Length = 269

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = -1

Query: 301 KDRTSKRSDAGSEPDLHAAARTGDLHAVESICNSNPLSINSRDRHSRT 158
           KD + K   +G+  DLH AAR+GDL AV+SI  SNPL++NSRD+HSRT
Sbjct: 3   KDNSHK---SGTANDLHTAARSGDLTAVQSILISNPLAVNSRDKHSRT 47


>ref|XP_003612598.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|355513933|gb|AES95556.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
           gi|388518069|gb|AFK47096.1| unknown [Medicago
           truncatula]
          Length = 266

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = -1

Query: 274 AGSEPDLHAAARTGDLHAVESICNSNPLSINSRDRHSRT 158
           +G+  DLHAAAR+GDL AV+SI  SNPL++NSRD+HSRT
Sbjct: 9   SGTGGDLHAAARSGDLIAVQSILISNPLAVNSRDKHSRT 47


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