BLASTX nr result
ID: Dioscorea21_contig00030075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00030075
(273 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20
emb|CBI18516.3| unnamed protein product [Vitis vinifera] 103 1e-20
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera] 103 1e-20
ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [S... 103 1e-20
ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [S... 103 2e-20
>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 103 bits (258), Expect = 1e-20
Identities = 47/90 (52%), Positives = 65/90 (72%)
Frame = +2
Query: 2 VEMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKL 181
++ G P+ +T+G LLK LC GGNL EAKKF +R+ IP AVD+ YN LL E CKSG L
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420
Query: 182 DDSLKLVDKMIENNIIPDIDTHNILLSGFC 271
+++ L DKM++NN++PD T++ LL+G C
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLC 1450
Score = 63.9 bits (154), Expect = 1e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +2
Query: 11 GHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKLDDS 190
G R N T+G LL LC AK+ R+ V Y +L+ LCK+G LD++
Sbjct: 1154 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEA 1213
Query: 191 LKLVDKMIENNIIPDIDTHNILLSGFC 271
++LV M ++ + PD+ T++ L++GFC
Sbjct: 1214 VQLVGNMYKDGVNPDVITYSSLINGFC 1240
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +2
Query: 5 EMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKLD 184
+ G PNV TF IL+ LC GNL +A ++ + F TYN LL CK G+
Sbjct: 977 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036
Query: 185 DSLKLVDKMIENNIIPDIDTHNILLSGFC 271
+++L+D MI I D+ T+N+ + C
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLC 1065
>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 103 bits (258), Expect = 1e-20
Identities = 47/90 (52%), Positives = 65/90 (72%)
Frame = +2
Query: 2 VEMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKL 181
++ G P+ +T+G LLK LC GGNL EAKKF +R+ IP AVD+ YN LL E CKSG L
Sbjct: 493 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 552
Query: 182 DDSLKLVDKMIENNIIPDIDTHNILLSGFC 271
+++ L DKM++NN++PD T++ LL+G C
Sbjct: 553 HEAVALFDKMVQNNVLPDSYTYSSLLTGLC 582
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +2
Query: 5 EMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKLD 184
+ G PNV TF IL+ LC GNL +A ++ + F TYN LL CK G+
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 185 DSLKLVDKMIENNIIPDIDTHNILLSGFC 271
+++L+D MI I D+ T+N+ + C
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLC 314
>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 103 bits (258), Expect = 1e-20
Identities = 47/90 (52%), Positives = 65/90 (72%)
Frame = +2
Query: 2 VEMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKL 181
++ G P+ +T+G LLK LC GGNL EAKKF +R+ IP AVD+ YN LL E CKSG L
Sbjct: 610 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 669
Query: 182 DDSLKLVDKMIENNIIPDIDTHNILLSGFC 271
+++ L DKM++NN++PD T++ LL+G C
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLC 699
Score = 63.9 bits (154), Expect = 1e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +2
Query: 11 GHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKLDDS 190
G R N T+G LL LC AK+ R+ V Y +L+ LCK+G LD++
Sbjct: 403 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEA 462
Query: 191 LKLVDKMIENNIIPDIDTHNILLSGFC 271
++LV M ++ + PD+ T++ L++GFC
Sbjct: 463 VQLVGNMYKDGVNPDVITYSSLINGFC 489
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +2
Query: 5 EMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKLD 184
+ G PNV TF IL+ LC GNL +A ++ + F TYN LL CK G+
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 185 DSLKLVDKMIENNIIPDIDTHNILLSGFC 271
+++L+D MI I D+ T+N+ + C
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLC 314
>ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
gi|241920691|gb|EER93835.1| hypothetical protein
SORBIDRAFT_01g014995 [Sorghum bicolor]
Length = 1014
Score = 103 bits (257), Expect = 1e-20
Identities = 48/90 (53%), Positives = 65/90 (72%)
Frame = +2
Query: 2 VEMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKL 181
V GH PNV T+ LL+ LC GG+L +AK+F +L IP A+D T+N LL+ +CK G L
Sbjct: 475 VRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTL 534
Query: 182 DDSLKLVDKMIENNIIPDIDTHNILLSGFC 271
D++L L +KM++NN +PDI T+ ILLSGFC
Sbjct: 535 DEALDLCEKMVKNNCLPDIHTYTILLSGFC 564
>ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein
SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 103 bits (256), Expect = 2e-20
Identities = 48/90 (53%), Positives = 65/90 (72%)
Frame = +2
Query: 2 VEMGHRPNVYTFGILLKALCNGGNLNEAKKFFHRILQIPFAVDTCTYNILLMELCKSGKL 181
V GH PNV T+ LL+ LC GG+L +AK+F +L IP AVD T+N LL+ +CK G L
Sbjct: 531 VRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTL 590
Query: 182 DDSLKLVDKMIENNIIPDIDTHNILLSGFC 271
D++L + +KM++NN +PDI T+ ILLSGFC
Sbjct: 591 DEALDICEKMVKNNCLPDIHTYTILLSGFC 620