BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030048
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   249   1e-63
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   248   2e-63
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S...   244   3e-62
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...   242   2e-61
gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat cont...   239   1e-60

>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  249 bits (635), Expect = 1e-63
 Identities = 146/411 (35%), Positives = 230/411 (55%), Gaps = 38/411 (9%)
 Frame = +2

Query: 62   KTLPLHHLKQIHAHLFRRGLHHDTILITKLIXXXXXXXXXXXXXXRIFDSIPDPDIVLCN 241
            K    +H+K++HA + +R LH+D  +  KLI               +F+ I DP++ L N
Sbjct: 32   KCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAV-NVFNQIQDPNVHLYN 90

Query: 242  AILRLYVQSSIHELAISFYASKVLARRFSPNARTFPYVSKACVGISNVELARQVHASVAK 421
             ++R +VQ+S    A + +        F+ N  T+P++ KAC G   +   + +H  V K
Sbjct: 91   TLIRAHVQNSQSLKAFATFFDMQKNGLFADNF-TYPFLLKACNGKGWLPTVQMIHCHVEK 149

Query: 422  SAEVCSDVFVLNSLMDMYFKCGKS--EDGIRVFGAMEKKDSISWNIMMAGLVNAGELRLA 595
                  D+FV NSL+D Y KCG       +++F  M +KD +SWN M+ GLV AG+L  A
Sbjct: 150  YG-FFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRA 208

Query: 596  RKVFDEMPQRDVVSWNTLVSAQAKAGEMETARELFDQMPERSLVSWNALISGYSQNGKHD 775
            RK+FDEM +RD VSWNT++    KAGEM  A  LF++MPER++VSW+ ++SGY + G  +
Sbjct: 209  RKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDME 268

Query: 776  -------------------------------EALLVFSRMLEAGMKPDCTTILSVLSACA 862
                                           EA  ++++M  AG+KPD  T++S+L+ACA
Sbjct: 269  MARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACA 328

Query: 863  SVQSPDIVLVEKIICLAKSM---TSTQVSTALLSLYAKIGRIDEARRVFDGIHDKDLIAW 1033
              +S  +VL +K+    K +    S  VS AL+ +YAK GR+D+A  +F+ +  +DL++W
Sbjct: 329  --ESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSW 386

Query: 1034 NAMIAGYSQNQRPAQAIELFQSMQ--GVKPDGMTMVSLIDACSQTGVLSQG 1180
            N M+ G + +    +AI+LF  MQ  G KPD +T+++++ AC+  G + QG
Sbjct: 387  NCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQG 437


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
            [Vitis vinifera]
          Length = 594

 Score =  248 bits (634), Expect = 2e-63
 Identities = 153/417 (36%), Positives = 232/417 (55%), Gaps = 42/417 (10%)
 Frame = +2

Query: 74   LHHLKQIHAHLFRRGLHHDTILITKLIXXXXXXXXXXXXXXRIFDSIPDPDIVLCNAILR 253
            L+ +KQIHA + +  LH ++ +  KLI               +F+ I DPD++L N ++R
Sbjct: 30   LNQVKQIHAQVLKANLHRESFVGQKLI-AAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88

Query: 254  LYVQSSIHELAISFY----ASKVLARRFSPNARTFPYVSKACVGISNVELARQVHASVAK 421
             +V++S   LA S +     S V A  F     T+P++ KAC G   V +   +HA V K
Sbjct: 89   AHVRNSEPLLAFSVFFEMQDSGVCADNF-----TYPFLLKACSGKVWVRVVEMIHAQVEK 143

Query: 422  SAEVCSDVFVLNSLMDMYFKCGKSEDGI----RVFGAMEKKDSISWNIMMAGLVNAGELR 589
                C D+FV NSL+D YFKCG   DG+    +VF  M ++D++SWN M+ GLV  GEL 
Sbjct: 144  MG-FCLDIFVPNSLIDSYFKCGL--DGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELG 200

Query: 590  LARKVFDEMPQRDVVSWNTLVSAQAKAGEMETARELFDQMPERSLVSWNALISGYSQNGK 769
             AR++FDEMP+RD VSWNT++    KAGEM  A ELF++MP R++VSW+ ++ GYS+ G 
Sbjct: 201  EARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGD 260

Query: 770  HD-------------------------------EALLVFSRMLEAGMKPDCTTILSVLSA 856
             D                               +A+ ++++M EAG+K D  T++S+LSA
Sbjct: 261  MDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSA 320

Query: 857  CASVQSPDI-VLVEKIICLAKSMTSTQVSTALLSLYAKIGRIDEARRVFDGIHDKDLIAW 1033
            CA      +   V   I   +   ST VS AL+ +YAK G ++ A  +F G+  KD+++W
Sbjct: 321  CAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSW 380

Query: 1034 NAMIAGYSQNQRPAQAIELFQSM--QGVKPDGMTMVSLIDACSQTGVLSQGEQIHTF 1198
            NA+I G + +    +A++LF  M  +G  PD +T V ++ AC+  G + +G  +H F
Sbjct: 381  NAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEG--LHYF 435


>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
            gi|241919651|gb|EER92795.1| hypothetical protein
            SORBIDRAFT_01g045970 [Sorghum bicolor]
          Length = 531

 Score =  244 bits (623), Expect = 3e-62
 Identities = 147/412 (35%), Positives = 232/412 (56%), Gaps = 15/412 (3%)
 Frame = +2

Query: 74   LHHLKQIHAHLFRRGLHHDTILITKLIXXXXXXXXXXXXXXR-IFDSIPDPDIVLCNAIL 250
            L  +KQ+HA +  RG   D   + +LI              R +FD IP PD  + N ++
Sbjct: 21   LRQIKQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMYNTLI 80

Query: 251  RLYVQSSIHELAISFYASKVLARRFS-------PNARTFPYVSKACVGISNVELARQVHA 409
            R    S     A+S YA   +AR  +       P+ RTFP+V +AC  +   E   QVHA
Sbjct: 81   RGAAHSYAPRDAVSIYAR--MARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHA 138

Query: 410  SVAKSAEVC-SDVFVLNSLMDMYFKCGKSEDGIRVFGAMEKKDSISWNIMMAGLVNAGEL 586
             V K+   C SD FV N+L+ M+  CG       +F    ++D+++W+ M++G    G++
Sbjct: 139  HVVKAG--CESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDI 196

Query: 587  RLARKVFDEMPQRDVVSWNTLVSAQAKAGEMETARELFDQMPERSLVSWNALISGYSQNG 766
              AR++FDE P +D+VSWN +++A AK G+M  ARELFD  P+R +VSWNA+ISGY + G
Sbjct: 197  GAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCG 256

Query: 767  KHDEALLVFSRMLEAGMKPDCTTILSVLSACASVQSPDI-VLVEKIIC--LAKSMTSTQV 937
             H +A+ +F +M   G KPD  T+LS+LSACA     D    + + +    ++   ST +
Sbjct: 257  SHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPSTVL 316

Query: 938  STALLSLYAKIGRIDEARRVFDGIHDKDLIAWNAMIAGYSQNQRPAQAIELFQSM-QG-V 1111
              AL+ +YAK G +  A  VF  + DK++  WN++I G + +    +AI++FQ M QG V
Sbjct: 317  GNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNV 376

Query: 1112 KPDGMTMVSLIDACSQTGVLSQGEQIHTFIQEN-KIQSDIFLTTALIDMYAK 1264
            KPD +T V+++ ACS  G++ +G +    +Q+   I+ ++     ++DM ++
Sbjct: 377  KPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSR 428


>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Vitis vinifera]
          Length = 729

 Score =  242 bits (617), Expect = 2e-61
 Identities = 147/411 (35%), Positives = 225/411 (54%), Gaps = 15/411 (3%)
 Frame = +2

Query: 77   HHLKQIHAHLFRRGLHHDTILITKLIXXXXXXXXXXXXXXRIFDSIPDPDIVLCNAILRL 256
            +HL+Q+HA +    LHH    +  LI               +F+S  +P++ +  ++LR 
Sbjct: 15   NHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRF 74

Query: 257  YVQSSIHELAISFYASKVLARRFSPNARTFPYVSKACVGISNVELARQVHASVAKSAEVC 436
            Y     H   +  Y  ++      P+A  +P + K+  G   +      HA V K     
Sbjct: 75   YSHLQDHAKVVLMY-EQMQGCGVRPDAFVYPILIKSA-GTGGIGF----HAHVLKLGHG- 127

Query: 437  SDVFVLNSLMDMYFKCGKSEDGIRVFGAME--KKDSISWNIMMAGLVNAGELRLARKVFD 610
            SD FV N+++DMY + G      +VF  +   ++    WN M++G         A+ +FD
Sbjct: 128  SDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFD 187

Query: 611  EMPQRDVVSWNTLVSAQAKAGEMETARELFDQMPERSLVSWNALISGYSQNGKHDEALLV 790
             MP+R+V++W  +V+  AK  ++E AR  FD MPERS+VSWNA++SGY+QNG  +EAL +
Sbjct: 188  VMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRL 247

Query: 791  FSRMLEAGMKPDCTTILSVLSACASVQSPDIVLVEKIICLAKSMTSTQ----------VS 940
            F  M+ AG++PD TT ++V+SAC+S   P         CLA S+  T           V 
Sbjct: 248  FDEMVNAGIEPDETTWVTVISACSSRGDP---------CLAASLVRTLHQKRIQLNCFVR 298

Query: 941  TALLSLYAKIGRIDEARRVFDGIHDKDLIAWNAMIAGYSQNQRPAQAIELFQSMQGVK-- 1114
            TALL +YAK G +D AR++F+ +  ++++ WN+MIAGY+QN + A AIELF+ M   K  
Sbjct: 299  TALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 358

Query: 1115 -PDGMTMVSLIDACSQTGVLSQGEQIHTFIQENKIQSDIFLTTALIDMYAK 1264
             PD +TMVS+I AC   G L  G  +  F+ EN+I+  I    A+I MY++
Sbjct: 359  TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 409



 Score =  140 bits (352), Expect = 9e-31
 Identities = 83/302 (27%), Positives = 161/302 (53%), Gaps = 43/302 (14%)
 Frame = +2

Query: 440  DVFVLNSLMDMYFKCGKSEDGIRVFGAMEKKDSISWNIMMAGLVNAGELRLARKVFDEMP 619
            +V    +++  Y K    E   R F  M ++  +SWN M++G    G    A ++FDEM 
Sbjct: 193  NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMV 252

Query: 620  ----QRDVVSWNTLVSA-----------------------------------QAKAGEME 682
                + D  +W T++SA                                    AK G+++
Sbjct: 253  NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLD 312

Query: 683  TARELFDQMPERSLVSWNALISGYSQNGKHDEALLVFSRMLEAG-MKPDCTTILSVLSAC 859
            +AR+LF+ MP R++V+WN++I+GY+QNG+   A+ +F  M+ A  + PD  T++SV+SAC
Sbjct: 313  SARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 372

Query: 860  ASVQSPDIV-LVEKIICLAKSMTSTQVSTALLSLYAKIGRIDEARRVFDGIHDKDLIAWN 1036
              + + ++   V + +   +   S     A++ +Y++ G +++A+RVF  +  +D++++N
Sbjct: 373  GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 432

Query: 1037 AMIAGYSQNQRPAQAIELFQSMQ--GVKPDGMTMVSLIDACSQTGVLSQGEQIHTFIQEN 1210
             +I+G++ +    +AI L  +M+  G++PD +T + ++ ACS  G+L +G ++   I++ 
Sbjct: 433  TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDP 492

Query: 1211 KI 1216
             I
Sbjct: 493  AI 494



 Score =  108 bits (269), Expect = 4e-21
 Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 42/311 (13%)
 Frame = +2

Query: 197  RIFDSIPDPDIVLCNAILRLYVQSSIHELAISFYASKVLARRFSPNARTFPYVSKACVGI 376
            R FD +P+  +V  NA+L  Y Q+ + E A+  +   V A    P+  T+  V  AC   
Sbjct: 215  RYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAG-IEPDETTWVTVISACSSR 273

Query: 377  SNVELARQVHASVAKSAEVCSDVFVLNSLMDMYFKCGKSEDGIRVFGAMEKKDSISWNIM 556
             +  LA  +  ++ +   +  + FV  +L+DMY K G  +   ++F  M  ++ ++WN M
Sbjct: 274  GDPCLAASLVRTLHQK-RIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSM 332

Query: 557  MAGLVNAGELRLARKVF-----------DEMPQRDVVS------------W--------- 640
            +AG    G+  +A ++F           DE+    V+S            W         
Sbjct: 333  IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ 392

Query: 641  --------NTLVSAQAKAGEMETARELFDQMPERSLVSWNALISGYSQNGKHDEALLVFS 796
                    N ++   ++ G ME A+ +F +M  R +VS+N LISG++ +G   EA+ + S
Sbjct: 393  IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 452

Query: 797  RMLEAGMKPDCTTILSVLSACASVQSPDIVLVEKIICLAKSMTSTQVS--TALLSLYAKI 970
             M E G++PD  T + VL+AC+        L+E+   + +S+    +     ++ L  ++
Sbjct: 453  TMKEGGIEPDRVTFIGVLTACSHAG-----LLEEGRKVFESIKDPAIDHYACMVDLLGRV 507

Query: 971  GRIDEARRVFD 1003
            G +++A+R  +
Sbjct: 508  GELEDAKRTME 518


>gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
            Japonica Group]
          Length = 545

 Score =  239 bits (609), Expect = 1e-60
 Identities = 140/411 (34%), Positives = 228/411 (55%), Gaps = 14/411 (3%)
 Frame = +2

Query: 74   LHHLKQIHAHLFRRGLHHDTILITKLIXXXXXXXXXXXXXXR-IFDSIPDPDIVLCNAIL 250
            L H+KQ+HA +  RG   D   + +L+                +FD IP PD  + N ++
Sbjct: 21   LRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLI 80

Query: 251  RLYVQSSIHELAISFYASKVLARR----FSPNARTFPYVSKACVGISNVELARQVHASVA 418
            R    ++    A+S Y +++L R       P+  TFP+V +AC  +   +   QVHA V 
Sbjct: 81   RGAAHTAAPRDAVSLY-TRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVV 139

Query: 419  KSAEVC-SDVFVLNSLMDMYFKCGKSEDGIRVFGAMEKKDSISWNIMMAGLVNAGELRLA 595
            K+   C SD FV N+L+ M+  CG       +F    ++D+++W+ M+ G    G++  A
Sbjct: 140  KAG--CESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAA 197

Query: 596  RKVFDEMPQRDVVSWNTLVSAQAKAGEMETARELFDQMPERSLVSWNALISGYSQNGKHD 775
            R +FDE P +D+VSWN +++A AK G+M  ARELFDQ+PER +VSWN +ISGY + G H 
Sbjct: 198  RDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHL 257

Query: 776  EALLVFSRMLEAGMKPDCTTILSVLSACASVQSPDIVLVEKIICLAKSMTSTQ-----VS 940
             AL +F +M   G KPD  T+LS+LSACA   S D+ + +++      M S       + 
Sbjct: 258  HALELFEQMQRMGEKPDIVTMLSLLSACA--DSGDLDVGQRLHSSLSDMFSRNGFPVVLG 315

Query: 941  TALLSLYAKIGRIDEARRVFDGIHDKDLIAWNAMIAGYSQNQRPAQAIELFQSM--QGVK 1114
             AL+ +YAK G +  A  VF  + DKD+  WN+++ G + +    ++I++F+ M    V+
Sbjct: 316  NALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVR 375

Query: 1115 PDGMTMVSLIDACSQTGVLSQGEQIHTFIQEN-KIQSDIFLTTALIDMYAK 1264
            PD +T V+++ ACS  G++ +G +    +Q   +++ +I     ++DM  +
Sbjct: 376  PDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGR 426