BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030043
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528862.1| pentatricopeptide repeat-containing protein,...   147   7e-34
ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_002510888.1| pentatricopeptide repeat-containing protein,...   122   4e-26
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26

>ref|XP_002528862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531713|gb|EEF33536.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 374

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/126 (53%), Positives = 90/126 (71%)
 Frame = +3

Query: 3   FYSQLRCQAMPTNNYTYPFLLHACSRNPVLSEGQQVHSHVVKLGLDSDLFVRNALIHFYS 182
           FYS +  + +  NNY++ FL   C +     EG Q+H HV+K G   D++VRNALIHF+ 
Sbjct: 110 FYSSMLRRFIRPNNYSFTFLFQGCGKGLGFIEGVQIHCHVIKFGFCEDVYVRNALIHFFF 169

Query: 183 ACCEMELSKRVFDECPSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMPERDVISWSSLIM 362
           ACC +E SK+VF+E P   D+V+WNAMLAG+A+ G+V V EK+FD M ERDVISW+++IM
Sbjct: 170 ACCRVECSKQVFEENPRRCDIVTWNAMLAGFARDGQVAVVEKMFDEMYERDVISWNTMIM 229

Query: 363 GYVQNG 380
            YV NG
Sbjct: 230 AYVHNG 235


>ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449479547|ref|XP_004155632.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/114 (56%), Positives = 84/114 (73%)
 Frame = +3

Query: 39  NNYTYPFLLHACSRNPVLSEGQQVHSHVVKLGLDSDLFVRNALIHFYSACCEMELSKRVF 218
           N +T  F+L ACS    + EG QV +HV+KLG   D+FVRNALIH Y  CC +E +K+VF
Sbjct: 132 NKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVF 191

Query: 219 DECPSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMPERDVISWSSLIMGYVQNG 380
           DE PS RDVVSWN+M+ G+ + G++ VA+K+F  MPE+DVISW ++I G VQNG
Sbjct: 192 DEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNG 245


>ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449504924|ref|XP_004162332.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 595

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/125 (48%), Positives = 82/125 (65%)
 Frame = +3

Query: 6   YSQLRCQAMPTNNYTYPFLLHACSRNPVLSEGQQVHSHVVKLGLDSDLFVRNALIHFYSA 185
           Y Q+   ++P N+YT+PFLL AC     + E  QVH  V+KLG  SD+F  NAL+H Y+ 
Sbjct: 76  YQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYAL 135

Query: 186 CCEMELSKRVFDECPSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMPERDVISWSSLIMG 365
           C E+  ++++FD  P ERD VSWN M+ GY KSG V  A  VF  MP ++V+SW+SLI G
Sbjct: 136 CGEIHCARQLFDNIP-ERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISG 194

Query: 366 YVQNG 380
            V+ G
Sbjct: 195 LVEAG 199


>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 6   YSQLRCQAMPTNNYTYPFLLHACSRNPVLSEGQQVHSHVVKLGLDSDLFVRNALIHFYSA 185
           Y Q+ C  +  +  T+PFLL  C+RN  +  G+ +H H +KLGL SDLFV+N+LI FYSA
Sbjct: 96  YKQMLCNDISPDCLTFPFLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSA 155

Query: 186 CCEMELSKRVFDECPSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMP-ERDVISWSSLIM 362
           C  +  S+++FDE  S RDVVSWN+M+ GY +SG +D +  +F  M   R+VI+W+S+I 
Sbjct: 156 CEFVSNSRKLFDEM-SNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIIT 214

Query: 363 GYVQNG 380
           G+VQ G
Sbjct: 215 GFVQGG 220



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/96 (30%), Positives = 54/96 (56%)
 Frame = +3

Query: 48  TYPFLLHACSRNPVLSEGQQVHSHVVKLGLDSDLFVRNALIHFYSACCEMELSKRVFDEC 227
           T   +L AC+    +  G+ VHS++ + GL+ D+ +  AL+  Y  C  ++ +  VF E 
Sbjct: 251 TIASVLSACAHLGAIDHGKWVHSYLRRSGLECDMVIGTALVDMYGKCGCLQRAYEVFREM 310

Query: 228 PSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMPERD 335
            SE+D ++W AM++ +A +G     ++ FD+  E +
Sbjct: 311 -SEKDTLAWTAMISVFALNG---FGKEAFDMFNEME 342


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  121 bits (303), Expect = 7e-26
 Identities = 52/126 (41%), Positives = 86/126 (68%)
 Frame = +3

Query: 3   FYSQLRCQAMPTNNYTYPFLLHACSRNPVLSEGQQVHSHVVKLGLDSDLFVRNALIHFYS 182
           +Y Q+  + +  N+YT+P L+  C     + +G+++H+ ++K G + DLFVRN+LIH YS
Sbjct: 146 YYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYS 205

Query: 183 ACCEMELSKRVFDECPSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMPERDVISWSSLIM 362
            C  +  ++ +F+ C S  D+V+WN+M+ GY K+G +  A ++F+ MPERD+ SW+S+I 
Sbjct: 206 VCGRIGDARAMFEVC-SISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIA 264

Query: 363 GYVQNG 380
           GYV NG
Sbjct: 265 GYVGNG 270



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +3

Query: 6   YSQLRCQAMPTNNYTYPFLLHACSRNPVLSEGQQVHSHVVKLG-LDSDLFVRNALIHFYS 182
           + ++  + MP N  T   +L AC+    L  G+ +HS++     ++ D+ +  AL+  Y+
Sbjct: 341 FDKMMGETMP-NEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYA 399

Query: 183 ACCEMELSKRVFDECPSERDVVSWNAMLAGYAKSGRVDVAEKVFDIMPER 332
            C  M+L++ VFD+  S R VVSWN+M+ GY   G+ D A ++F  M +R
Sbjct: 400 KCGAMDLARDVFDKM-SNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 448