BLASTX nr result

ID: Dioscorea21_contig00030019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030019
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
emb|CAA11552.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arabid...   107   1e-21
ref|NP_201376.1| 2-oxoglutarate dehydrogenase, E1 component [Ara...   107   1e-21
ref|XP_002864978.1| E1 subunit of 2-oxoglutarate dehydrogenase [...   107   1e-21
ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [S...   107   1e-21

>ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|222851892|gb|EEE89439.1|
           predicted protein [Populus trichocarpa]
          Length = 1021

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290 LLVEGNYVRLSGQHVERGTCSHRHSVIHDQETGEKYSLLSHWSSTKKRSYLP---SAIVS 120
           LLVEGN+VRLSGQ VERGT SHRHSVIHDQETGEKY  L H +  +         S++  
Sbjct: 649 LLVEGNHVRLSGQDVERGTFSHRHSVIHDQETGEKYCPLDHVTINQNEEMFTVSNSSLSE 708

Query: 119 YSRCWIELGYSMENLNSLVISES*FGDFVNGAQVMLISF 3
           +     ELGYSME+ NSLVI E+ FGDF NGAQV+   F
Sbjct: 709 FGVLGFELGYSMESPNSLVIWEAQFGDFANGAQVIFDQF 747


>emb|CAA11552.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arabidopsis thaliana]
          Length = 1027

 Score =  107 bits (266), Expect = 1e-21
 Identities = 58/99 (58%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290 LLVEGNYVRLSGQHVERGTCSHRHSVIHDQETGEKYSLLSHWSSTKKRSYLP---SAIVS 120
           L+VEGN+VRLSGQ VERGT SHRHSV+HDQETGE+Y  L H    +         S++  
Sbjct: 654 LVVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLIKNQDPEMFTVSNSSLSE 713

Query: 119 YSRCWIELGYSMENLNSLVISES*FGDFVNGAQVMLISF 3
           +     ELGYSMEN NSLVI E+ FGDF NGAQVM   F
Sbjct: 714 FGVLGFELGYSMENPNSLVIWEAQFGDFANGAQVMFDQF 752


>ref|NP_201376.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana]
           gi|10177333|dbj|BAB10682.1| 2-oxoglutarate
           dehydrogenase, E1 component [Arabidopsis thaliana]
           gi|18389254|gb|AAL67070.1| putative 2-oxoglutarate
           dehydrogenase E1 component [Arabidopsis thaliana]
           gi|20465597|gb|AAM20281.1| putative 2-oxoglutarate
           dehydrogenase E1 component [Arabidopsis thaliana]
           gi|332010718|gb|AED98101.1| 2-oxoglutarate
           dehydrogenase, E1 component [Arabidopsis thaliana]
          Length = 1025

 Score =  107 bits (266), Expect = 1e-21
 Identities = 58/99 (58%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290 LLVEGNYVRLSGQHVERGTCSHRHSVIHDQETGEKYSLLSHWSSTKKRSYLP---SAIVS 120
           L+VEGN+VRLSGQ VERGT SHRHSV+HDQETGE+Y  L H    +         S++  
Sbjct: 652 LVVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLIKNQDPEMFTVSNSSLSE 711

Query: 119 YSRCWIELGYSMENLNSLVISES*FGDFVNGAQVMLISF 3
           +     ELGYSMEN NSLVI E+ FGDF NGAQVM   F
Sbjct: 712 FGVLGFELGYSMENPNSLVIWEAQFGDFANGAQVMFDQF 750


>ref|XP_002864978.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata
           subsp. lyrata] gi|297310813|gb|EFH41237.1| E1 subunit of
           2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1025

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290 LLVEGNYVRLSGQHVERGTCSHRHSVIHDQETGEKYSLLSHWSSTKKRSYLP---SAIVS 120
           L+VEGN+VRLSGQ VERGT SHRHSV+HDQETGE+Y  L H +  +         S++  
Sbjct: 652 LVVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLTMNQDPEMFTVSNSSLSE 711

Query: 119 YSRCWIELGYSMENLNSLVISES*FGDFVNGAQVMLISF 3
           +     ELGYSMEN NSLV+ E+ FGDF NGAQVM   F
Sbjct: 712 FGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVMFDQF 750


>ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor]
           gi|241937490|gb|EES10635.1| hypothetical protein
           SORBIDRAFT_06g013940 [Sorghum bicolor]
          Length = 1025

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290 LLVEGNYVRLSGQHVERGTCSHRHSVIHDQETGEKYSLLSHWSSTKKRSYLP---SAIVS 120
           L++EGN+VRLSGQ VERGT SHRHSVIHDQETGE+Y  L H    +         S++  
Sbjct: 653 LIIEGNHVRLSGQDVERGTFSHRHSVIHDQETGEQYCPLDHLVMNQDEELFTVSNSSLSE 712

Query: 119 YSRCWIELGYSMENLNSLVISES*FGDFVNGAQVMLISF 3
           ++    ELGYSMEN NSLVI E+ FGDF NGAQV+   F
Sbjct: 713 FAVLGFELGYSMENPNSLVIWEAQFGDFANGAQVIFDQF 751


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