BLASTX nr result

ID: Dioscorea21_contig00030016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030016
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   154   7e-36
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   154   7e-36
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   141   5e-32
ref|XP_002282775.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...   128   2e-31
emb|CBI21061.3| unnamed protein product [Vitis vinifera]              128   2e-31

>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  154 bits (389), Expect = 7e-36
 Identities = 66/126 (52%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = -3

Query: 385 LLSNEDTETYIWLFRTWLECMSGKAPNAIITDQCMAIQGAIRTVFPNSHHRLCLWHIMKK 206
           LLSNE+TET++WLFR+WL CMS KAPNAIITDQC A+Q AI  VFP + HR CLWHIMKK
Sbjct: 277 LLSNEETETFVWLFRSWLSCMSNKAPNAIITDQCRAMQNAIMEVFPEARHRWCLWHIMKK 336

Query: 205 VPEKLGGLVHYKAVKKILKCIVYESVNIQEFEDNWLKMIEEYNL-GKKWMVEFFIHMSAS 29
           +PEKLGG + Y+ +   L  +VY+S+N  +F+  W+KMI+E++L   +W+   + +    
Sbjct: 337 IPEKLGGYLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSLQDNEWLAGLYDNRELW 396

Query: 28  LGSYIR 11
           + +Y++
Sbjct: 397 VPAYVK 402


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  154 bits (389), Expect = 7e-36
 Identities = 66/126 (52%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = -3

Query: 385 LLSNEDTETYIWLFRTWLECMSGKAPNAIITDQCMAIQGAIRTVFPNSHHRLCLWHIMKK 206
           LLSNE+TET++WLFR+WL CMS KAPNAIITDQC A+Q AI  VFP + HR CLWHIMKK
Sbjct: 277 LLSNEETETFVWLFRSWLSCMSNKAPNAIITDQCRAMQNAIMEVFPEARHRWCLWHIMKK 336

Query: 205 VPEKLGGLVHYKAVKKILKCIVYESVNIQEFEDNWLKMIEEYNL-GKKWMVEFFIHMSAS 29
           +PEKLGG + Y+ +   L  +VY+S+N  +F+  W+KMI+E++L   +W+   + +    
Sbjct: 337 IPEKLGGYLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSLQDNEWLAGLYDNRELW 396

Query: 28  LGSYIR 11
           + +Y++
Sbjct: 397 VPAYVK 402


>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/126 (53%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = -3

Query: 385 LLSNEDTETYIWLFRTWLECMSGKAPNAIITDQCMAIQGAIRTVFPNSHHRLCLWHIMKK 206
           LLSNEDT+T+ WLF+TWLECM G+APNAIITDQ  A++ AI  VFP + HR CLWH+MKK
Sbjct: 606 LLSNEDTKTFSWLFKTWLECMHGRAPNAIITDQDRAMKKAIEDVFPKARHRWCLWHLMKK 665

Query: 205 VPEKLGGLVHYKAVKKILKCIVYESVNIQEFEDNWLKMIEEYNL-GKKWMVEFFIHMSAS 29
           VPEKLG   HY+++K +L   VY+S +I +F + W KMIE Y L   +W+   F      
Sbjct: 666 VPEKLGRHSHYESIKLLLHDAVYDSSSISDFMEKWKKMIECYELHDNEWLKGLFDERYRW 725

Query: 28  LGSYIR 11
           +  Y+R
Sbjct: 726 VPVYVR 731


>ref|XP_002282775.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Vitis vinifera]
          Length = 668

 Score =  128 bits (322), Expect(2) = 2e-31
 Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
 Frame = -3

Query: 388 GLLSNEDTETYIWLFRTWLECMSGKAPNAIITDQCMAIQGAIRTVFPNSHHRLCLWHIMK 209
           G L +E  E ++W+FR WL CM G+ P  IITDQC  +Q AI  VFP + H  CLW+IM+
Sbjct: 299 GFLGHESVEYFVWIFRAWLTCMLGRPPQVIITDQCKPLQNAISEVFPGARHCYCLWYIMQ 358

Query: 208 KVPEKLGGLVHYKAVKKILKCIVYESVNIQEFEDNWLKMIEEYNLG-KKWM 59
           +VPEKLGGL  ++ +K+ +   VYES+ I EFE +W  MI+ +NLG  KW+
Sbjct: 359 RVPEKLGGLKGFETIKRQMNKAVYESLKIAEFETSWADMIKRHNLGDNKWL 409



 Score = 32.3 bits (72), Expect(2) = 2e-31
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 75  LEKNGWLNSLYICRHRWAPIYVKE 4
           L  N WL +LY  R RW P+Y+K+
Sbjct: 403 LGDNKWLQTLYEDRQRWVPVYLKD 426


>emb|CBI21061.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  128 bits (322), Expect(2) = 2e-31
 Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
 Frame = -3

Query: 388 GLLSNEDTETYIWLFRTWLECMSGKAPNAIITDQCMAIQGAIRTVFPNSHHRLCLWHIMK 209
           G L +E  E ++W+FR WL CM G+ P  IITDQC  +Q AI  VFP + H  CLW+IM+
Sbjct: 182 GFLGHESVEYFVWIFRAWLTCMLGRPPQVIITDQCKPLQNAISEVFPGARHCYCLWYIMQ 241

Query: 208 KVPEKLGGLVHYKAVKKILKCIVYESVNIQEFEDNWLKMIEEYNLG-KKWM 59
           +VPEKLGGL  ++ +K+ +   VYES+ I EFE +W  MI+ +NLG  KW+
Sbjct: 242 RVPEKLGGLKGFETIKRQMNKAVYESLKIAEFETSWADMIKRHNLGDNKWL 292



 Score = 32.3 bits (72), Expect(2) = 2e-31
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 75  LEKNGWLNSLYICRHRWAPIYVKE 4
           L  N WL +LY  R RW P+Y+K+
Sbjct: 286 LGDNKWLQTLYEDRQRWVPVYLKD 309


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