BLASTX nr result

ID: Dioscorea21_contig00029962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029962
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ13376.1| hypothetical protein OsJ_03294 [Oryza sativa Japo...    99   4e-19
gb|EAY75654.1| hypothetical protein OsI_03559 [Oryza sativa Indi...    99   4e-19
ref|NP_001044098.1| Os01g0721900 [Oryza sativa Japonica Group] g...    99   4e-19
gb|EAY99238.1| hypothetical protein OsI_21200 [Oryza sativa Indi...    94   1e-17
ref|NP_001056483.1| Os05g0589600 [Oryza sativa Japonica Group] g...    94   1e-17

>gb|EAZ13376.1| hypothetical protein OsJ_03294 [Oryza sativa Japonica Group]
          Length = 332

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/99 (53%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = -2

Query: 298 QRRDFGNGSVNGF-GGEDGDAEKVFXXXXXXXXXXXXXRHPFRGIRRGGHVNGEVGGDYE 122
           Q RDFG  + NG+ GG  G                   R PF G RRGG+ NGE G D E
Sbjct: 51  QNRDFGGDNANGYQGGYGGGYGDGAVAAGGEGDRERGPRAPFHGGRRGGYRNGEYGDDSE 110

Query: 121 RPVRRLYERRSGTGRGNEIKREGAGRGNWGTPTDDVIAQ 5
           RP RR YER SGTGRG E+KR+GAGRGNWGT TD+ +AQ
Sbjct: 111 RPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQ 149


>gb|EAY75654.1| hypothetical protein OsI_03559 [Oryza sativa Indica Group]
          Length = 332

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/99 (53%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = -2

Query: 298 QRRDFGNGSVNGF-GGEDGDAEKVFXXXXXXXXXXXXXRHPFRGIRRGGHVNGEVGGDYE 122
           Q RDFG  + NG+ GG  G                   R PF G RRGG+ NGE G D E
Sbjct: 51  QNRDFGGDNANGYQGGYGGGYGDGAVAAGGEGDRERGPRAPFHGGRRGGYRNGEYGDDSE 110

Query: 121 RPVRRLYERRSGTGRGNEIKREGAGRGNWGTPTDDVIAQ 5
           RP RR YER SGTGRG E+KR+GAGRGNWGT TD+ +AQ
Sbjct: 111 RPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQ 149


>ref|NP_001044098.1| Os01g0721900 [Oryza sativa Japonica Group]
           gi|18461235|dbj|BAB84432.1| putative nuclear RNA binding
           protein A [Oryza sativa Japonica Group]
           gi|113533629|dbj|BAF06012.1| Os01g0721900 [Oryza sativa
           Japonica Group]
          Length = 380

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/99 (53%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = -2

Query: 298 QRRDFGNGSVNGF-GGEDGDAEKVFXXXXXXXXXXXXXRHPFRGIRRGGHVNGEVGGDYE 122
           Q RDFG  + NG+ GG  G                   R PF G RRGG+ NGE G D E
Sbjct: 99  QNRDFGGDNANGYQGGYGGGYGDGAVAAGGEGDRERGPRAPFHGGRRGGYRNGEYGDDSE 158

Query: 121 RPVRRLYERRSGTGRGNEIKREGAGRGNWGTPTDDVIAQ 5
           RP RR YER SGTGRG E+KR+GAGRGNWGT TD+ +AQ
Sbjct: 159 RPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQ 197


>gb|EAY99238.1| hypothetical protein OsI_21200 [Oryza sativa Indica Group]
          Length = 383

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/112 (49%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
 Frame = -2

Query: 313 GFRNDQRRDFGNGSVNGFGGE--------DGDAEKVFXXXXXXXXXXXXXRHPFRGI-RR 161
           G R   RRDFG G  NGF G         DG   +               R P+RG  RR
Sbjct: 87  GGRGGPRRDFGEGDANGFEGGYGGGGGFGDGGLARGEDGEGRQAERGRGPRQPYRGGGRR 146

Query: 160 GGHVNGEVGGDYERPVRRLYERRSGTGRGNEIKREGAGRGNWGTPTDDVIAQ 5
           GG+ +G+ G DY RP RR YER SGTGRG E+KREG+GRGNWGT TD+ +AQ
Sbjct: 147 GGYSDGQSGDDYGRP-RRAYERHSGTGRGYELKREGSGRGNWGTVTDEGLAQ 197


>ref|NP_001056483.1| Os05g0589600 [Oryza sativa Japonica Group]
           gi|47777369|gb|AAT38003.1| putative nuclear RNA binding
           protein A [Oryza sativa Japonica Group]
           gi|49328113|gb|AAT58811.1| unknown protein [Oryza sativa
           Japonica Group] gi|113580034|dbj|BAF18397.1|
           Os05g0589600 [Oryza sativa Japonica Group]
           gi|222632748|gb|EEE64880.1| hypothetical protein
           OsJ_19739 [Oryza sativa Japonica Group]
          Length = 383

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/112 (49%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
 Frame = -2

Query: 313 GFRNDQRRDFGNGSVNGFGGE--------DGDAEKVFXXXXXXXXXXXXXRHPFRGI-RR 161
           G R   RRDFG G  NGF G         DG   +               R P+RG  RR
Sbjct: 87  GGRGGPRRDFGEGDANGFEGGYGGGGGFGDGGLARGEDGEGRQAERGRGPRQPYRGGGRR 146

Query: 160 GGHVNGEVGGDYERPVRRLYERRSGTGRGNEIKREGAGRGNWGTPTDDVIAQ 5
           GG+ +G+ G DY RP RR YER SGTGRG E+KREG+GRGNWGT TD+ +AQ
Sbjct: 147 GGYSDGQSGDDYGRP-RRAYERHSGTGRGYELKREGSGRGNWGTVTDEGLAQ 197


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