BLASTX nr result

ID: Dioscorea21_contig00029961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029961
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
dbj|BAJ34290.1| unnamed protein product [Thellungiella halophila]      76   2e-12
ref|XP_002873250.1| hypothetical protein ARALYDRAFT_908558 [Arab...    76   2e-12
gb|ABB36604.1| hairpin-induced 1-like protein NHL18B [Brassica n...    76   2e-12
ref|XP_002876147.1| hypothetical protein ARALYDRAFT_485614 [Arab...    76   3e-12

>ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|222867424|gb|EEF04555.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = +2

Query: 2   IILFIILIVWLALRPTKPRFILQNTDIIQFNLXXXXXXXXXXXXXXXXHNPNEHVGIYYD 181
           I+L IIL+VW  LRP+KP+FILQ+  +  FN+                 NPN+ VGIYYD
Sbjct: 30  IVLIIILLVWAILRPSKPKFILQDATVYAFNVSSPNVLTSNFQVTLSSRNPNDKVGIYYD 89

Query: 182 NLNVFISYKSQQITLPSS 235
            L+V+ +Y++QQITL +S
Sbjct: 90  KLDVYATYRNQQITLRTS 107


>dbj|BAJ34290.1| unnamed protein product [Thellungiella halophila]
          Length = 208

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/75 (46%), Positives = 46/75 (61%)
 Frame = +2

Query: 2   IILFIILIVWLALRPTKPRFILQNTDIIQFNLXXXXXXXXXXXXXXXXHNPNEHVGIYYD 181
           I+L  I +VW+ LRPTKPRFILQ+  +  FNL                 NPN  +GIYYD
Sbjct: 29  IVLITIFLVWVILRPTKPRFILQDATVFAFNLSQPNLLTSNFQITFASRNPNSKIGIYYD 88

Query: 182 NLNVFISYKSQQITL 226
            L+V+ +Y++QQITL
Sbjct: 89  RLHVYATYRNQQITL 103


>ref|XP_002873250.1| hypothetical protein ARALYDRAFT_908558 [Arabidopsis lyrata subsp.
           lyrata] gi|297319087|gb|EFH49509.1| hypothetical protein
           ARALYDRAFT_908558 [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   IILFIILIVWLALRPTKPRFILQNTDIIQFNLXXXXXXXXXXXXXXXX--HNPNEHVGIY 175
           IIL +IL+VW  L+P+KPRFILQ+  +  FN+                   NPN+ +GIY
Sbjct: 34  IILLVILLVWAILQPSKPRFILQDATVFNFNVSGNPPNLLTSNFQMTLSSRNPNDKIGIY 93

Query: 176 YDNLNVFISYKSQQITLPSS 235
           YD L+V+ SY+SQQIT P+S
Sbjct: 94  YDRLDVYASYRSQQITFPTS 113


>gb|ABB36604.1| hairpin-induced 1-like protein NHL18B [Brassica napus]
          Length = 208

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/75 (46%), Positives = 46/75 (61%)
 Frame = +2

Query: 2   IILFIILIVWLALRPTKPRFILQNTDIIQFNLXXXXXXXXXXXXXXXXHNPNEHVGIYYD 181
           I+L  I +VW+ LRPTKPRFILQ+  +  FNL                 NPN  +GIYYD
Sbjct: 29  IVLITIFLVWVILRPTKPRFILQDATVFAFNLSQPNLLTSNFQITFASRNPNSKIGIYYD 88

Query: 182 NLNVFISYKSQQITL 226
            L+V+ +Y++QQITL
Sbjct: 89  RLHVYATYRNQQITL 103


>ref|XP_002876147.1| hypothetical protein ARALYDRAFT_485614 [Arabidopsis lyrata subsp.
           lyrata] gi|297321985|gb|EFH52406.1| hypothetical protein
           ARALYDRAFT_485614 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = +2

Query: 2   IILFIILIVWLALRPTKPRFILQNTDIIQFNLXXXXXXXXXXXXXXXXHNPNEHVGIYYD 181
           I+L  I +VW+ LRPTKPRF+LQ+  +  FNL                 NPN  +GIYYD
Sbjct: 29  IVLITIFLVWVILRPTKPRFVLQDATVFAFNLSQPNLLTSNFQITIASRNPNSKIGIYYD 88

Query: 182 NLNVFISYKSQQITL 226
            L+V+ +Y++QQITL
Sbjct: 89  RLHVYATYRNQQITL 103


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