BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029948
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294348.1| photosystem II 44 kDa protein [Dioscorea ele...   273   1e-71
ref|YP_007475871.1| photosystem II CP43 chlorophyll apoprotein [...   271   5e-71
gb|AAZ04080.1| photosystem II 44 kDa protein [Yucca schidigera] ...   271   5e-71
ref|YP_358574.1| photosystem II 44 kDa protein [Phalaenopsis aph...   271   5e-71
gb|AFU94714.1| PsbC, partial (chloroplast) [Medusagyne oppositif...   271   5e-71

>ref|YP_001294348.1| photosystem II 44 kDa protein [Dioscorea elephantipes]
           gi|221222590|sp|A6MMK3.1|PSBC_DIOEL RecName:
           Full=Photosystem II CP43 chlorophyll apoprotein;
           AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|148668042|gb|ABR01426.1| photosystem
           II CP43 chlorophyll apoprotein [Dioscorea elephantipes]
          Length = 473

 Score =  273 bits (698), Expect = 1e-71
 Identities = 135/158 (85%), Positives = 135/158 (85%)
 Frame = +2

Query: 5   TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 184
           TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL
Sbjct: 316 TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 375

Query: 185 DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXX 364
           DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS      
Sbjct: 376 DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGF 435

Query: 365 XXXXXXXWHXXXXXXXXXXFEKGIDRDLEPVLSMTPLS 478
                  WH          FEKGIDRDLEPVLSMTPLS
Sbjct: 436 FLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLSMTPLS 473


>ref|YP_007475871.1| photosystem II CP43 chlorophyll apoprotein [Calamus caryotoides]
           gi|449326353|gb|AGE92936.1| photosystem II CP43
           chlorophyll apoprotein [Calamus caryotoides]
          Length = 473

 Score =  271 bits (692), Expect = 5e-71
 Identities = 134/158 (84%), Positives = 134/158 (84%)
 Frame = +2

Query: 5   TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 184
           TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL
Sbjct: 316 TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 375

Query: 185 DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXX 364
           DL RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS      
Sbjct: 376 DLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGF 435

Query: 365 XXXXXXXWHXXXXXXXXXXFEKGIDRDLEPVLSMTPLS 478
                  WH          FEKGIDRDLEPVLSMTPLS
Sbjct: 436 FLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLSMTPLS 473


>gb|AAZ04080.1| photosystem II 44 kDa protein [Yucca schidigera]
           gi|372484065|gb|AEX95674.1| photosystem II CP43
           chlorophyll apoprotein (chloroplast) [Camassia
           scilloides] gi|372484069|gb|AEX95676.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Hosta
           ventricosa] gi|372484071|gb|AEX95677.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Manfreda
           virginica] gi|372484073|gb|AEX95678.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Polianthes
           sp. Pires 2011-05]
          Length = 473

 Score =  271 bits (692), Expect = 5e-71
 Identities = 134/158 (84%), Positives = 134/158 (84%)
 Frame = +2

Query: 5   TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 184
           TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL
Sbjct: 316 TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 375

Query: 185 DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXX 364
           DL RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS      
Sbjct: 376 DLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGF 435

Query: 365 XXXXXXXWHXXXXXXXXXXFEKGIDRDLEPVLSMTPLS 478
                  WH          FEKGIDRDLEPVLSMTPLS
Sbjct: 436 FLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLSMTPLS 473


>ref|YP_358574.1| photosystem II 44 kDa protein [Phalaenopsis aphrodite subsp.
           formosana] gi|385153473|ref|YP_006073264.1| photosystem
           II 44 kDa protein (chloroplast) [Phalaenopsis equestris]
           gi|122213439|sp|Q3BAP4.1|PSBC_PHAAO RecName:
           Full=Photosystem II CP43 chlorophyll apoprotein;
           AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|58802779|gb|AAW82499.1| photosystem
           II 44 kDa protein [Phalaenopsis aphrodite subsp.
           formosana] gi|329668838|gb|AEB96285.1| photosystem II 44
           kDa protein (chloroplast) [Phalaenopsis equestris]
          Length = 473

 Score =  271 bits (692), Expect = 5e-71
 Identities = 134/158 (84%), Positives = 134/158 (84%)
 Frame = +2

Query: 5   TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 184
           TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL
Sbjct: 316 TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 375

Query: 185 DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXX 364
           DL RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS      
Sbjct: 376 DLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGF 435

Query: 365 XXXXXXXWHXXXXXXXXXXFEKGIDRDLEPVLSMTPLS 478
                  WH          FEKGIDRDLEPVLSMTPLS
Sbjct: 436 FLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLSMTPLS 473


>gb|AFU94714.1| PsbC, partial (chloroplast) [Medusagyne oppositifolia]
          Length = 473

 Score =  271 bits (692), Expect = 5e-71
 Identities = 134/158 (84%), Positives = 134/158 (84%)
 Frame = +2

Query: 5   TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 184
           TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL
Sbjct: 316 TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGL 375

Query: 185 DLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXX 364
           DL RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS      
Sbjct: 376 DLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGF 435

Query: 365 XXXXXXXWHXXXXXXXXXXFEKGIDRDLEPVLSMTPLS 478
                  WH          FEKGIDRDLEPVLSMTPLS
Sbjct: 436 FLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLSMTPLS 473