BLASTX nr result

ID: Dioscorea21_contig00029933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029933
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137198.1| PREDICTED: probable mitochondrial-processing...    71   6e-22
gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta...    71   6e-22
ref|XP_004156557.1| PREDICTED: probable mitochondrial-processing...    71   6e-22
ref|XP_002468288.1| hypothetical protein SORBIDRAFT_01g043060 [S...    71   2e-21
ref|XP_002284370.1| PREDICTED: probable mitochondrial-processing...    71   2e-21

>ref|XP_004137198.1| PREDICTED: probable mitochondrial-processing peptidase subunit
           beta-like [Cucumis sativus]
          Length = 528

 Score = 70.9 bits (172), Expect(2) = 6e-22
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +3

Query: 27  FAVAFNGASWTDPDSVALMVIQSALDSWSKSVAGGKHMG 143
           FA+AFNGASWTDPDS+ALMV+Q+ L SW+KS  GGKHMG
Sbjct: 335 FAIAFNGASWTDPDSIALMVMQAMLGSWNKSAGGGKHMG 373



 Score = 58.2 bits (139), Expect(2) = 6e-22
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +2

Query: 143 RSAINEVAESMAAFNTNYKDTGLFGVYAVVK 235
           R AINEVAESM AFNTNYKDTGLFGVYAV K
Sbjct: 379 RVAINEVAESMMAFNTNYKDTGLFGVYAVAK 409


>gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta subunit [Cucumis melo]
          Length = 528

 Score = 70.9 bits (172), Expect(2) = 6e-22
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +3

Query: 27  FAVAFNGASWTDPDSVALMVIQSALDSWSKSVAGGKHMG 143
           FA+AFNGASWTDPDS+ALMV+Q+ L SW+KS  GGKHMG
Sbjct: 335 FAIAFNGASWTDPDSIALMVMQAMLGSWNKSAGGGKHMG 373



 Score = 58.2 bits (139), Expect(2) = 6e-22
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +2

Query: 143 RSAINEVAESMAAFNTNYKDTGLFGVYAVVK 235
           R AINEVAESM AFNTNYKDTGLFGVYAV K
Sbjct: 379 RVAINEVAESMMAFNTNYKDTGLFGVYAVAK 409


>ref|XP_004156557.1| PREDICTED: probable mitochondrial-processing peptidase subunit
           beta-like [Cucumis sativus]
          Length = 440

 Score = 70.9 bits (172), Expect(2) = 6e-22
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +3

Query: 27  FAVAFNGASWTDPDSVALMVIQSALDSWSKSVAGGKHMG 143
           FA+AFNGASWTDPDS+ALMV+Q+ L SW+KS  GGKHMG
Sbjct: 335 FAIAFNGASWTDPDSIALMVMQAMLGSWNKSAGGGKHMG 373



 Score = 58.2 bits (139), Expect(2) = 6e-22
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +2

Query: 143 RSAINEVAESMAAFNTNYKDTGLFGVYAVVK 235
           R AINEVAESM AFNTNYKDTGLFGVYAV K
Sbjct: 379 RVAINEVAESMMAFNTNYKDTGLFGVYAVAK 409


>ref|XP_002468288.1| hypothetical protein SORBIDRAFT_01g043060 [Sorghum bicolor]
           gi|241922142|gb|EER95286.1| hypothetical protein
           SORBIDRAFT_01g043060 [Sorghum bicolor]
          Length = 530

 Score = 70.9 bits (172), Expect(2) = 2e-21
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = +3

Query: 27  FAVAFNGASWTDPDSVALMVIQSALDSWSKSVAGGKHMG 143
           FAVAFNGASW DPDSVALMV+QS L SW+KS  GGKHMG
Sbjct: 337 FAVAFNGASWVDPDSVALMVMQSMLGSWNKSAGGGKHMG 375



 Score = 56.2 bits (134), Expect(2) = 2e-21
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +2

Query: 143 RSAINEVAESMAAFNTNYKDTGLFGVYAVVK 235
           R+AIN++AES+ AFNTNYKDTGLFGVYAV K
Sbjct: 381 RAAINDIAESVMAFNTNYKDTGLFGVYAVAK 411


>ref|XP_002284370.1| PREDICTED: probable mitochondrial-processing peptidase subunit beta
           [Vitis vinifera]
          Length = 523

 Score = 71.2 bits (173), Expect(2) = 2e-21
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +3

Query: 27  FAVAFNGASWTDPDSVALMVIQSALDSWSKSVAGGKHMG 143
           FAVAFNGASWTDPDS+ALMV+QS L SW+K+  GGKHMG
Sbjct: 330 FAVAFNGASWTDPDSIALMVMQSMLGSWNKNAGGGKHMG 368



 Score = 55.8 bits (133), Expect(2) = 2e-21
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +2

Query: 143 RSAINEVAESMAAFNTNYKDTGLFGVYAVVK 235
           R  INE+AESM AFNTNYKDTGLFGVYA+ K
Sbjct: 374 RVGINEIAESMMAFNTNYKDTGLFGVYAIAK 404


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