BLASTX nr result
ID: Dioscorea21_contig00029922
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00029922 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [S... 62 4e-12 ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea ma... 62 4e-12 gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase fami... 62 4e-12 gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryz... 60 8e-12 ref|NP_001048702.1| Os03g0108600 [Oryza sativa Japonica Group] g... 60 8e-12 >ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [Sorghum bicolor] gi|241922526|gb|EER95670.1| hypothetical protein SORBIDRAFT_01g050040 [Sorghum bicolor] Length = 656 Score = 61.6 bits (148), Expect(2) = 4e-12 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = +3 Query: 3 DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92 DIYNK+VETFPDCEVIMGPG+HR SSRLEE Sbjct: 452 DIYNKVVETFPDCEVIMGPGVHRTSSRLEE 481 Score = 34.3 bits (77), Expect(2) = 4e-12 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 167 VRKVLVDCSGDVEGEKSPETAF 232 + ++LVDCSGD EK+PETAF Sbjct: 479 LEEILVDCSGDDNEEKNPETAF 500 >ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea mays] gi|219887353|gb|ACL54051.1| unknown [Zea mays] gi|413957213|gb|AFW89862.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea mays] Length = 655 Score = 61.6 bits (148), Expect(2) = 4e-12 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = +3 Query: 3 DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92 DIYNK+VETFPDCEVIMGPG+HR SSRLEE Sbjct: 451 DIYNKVVETFPDCEVIMGPGVHRTSSRLEE 480 Score = 34.3 bits (77), Expect(2) = 4e-12 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 167 VRKVLVDCSGDVEGEKSPETAF 232 + ++LVDCSGD EK+PETAF Sbjct: 478 LEEILVDCSGDDNEEKNPETAF 499 >gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea mays] Length = 649 Score = 61.6 bits (148), Expect(2) = 4e-12 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = +3 Query: 3 DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92 DIYNK+VETFPDCEVIMGPG+HR SSRLEE Sbjct: 445 DIYNKVVETFPDCEVIMGPGVHRTSSRLEE 474 Score = 34.3 bits (77), Expect(2) = 4e-12 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 167 VRKVLVDCSGDVEGEKSPETAF 232 + ++LVDCSGD EK+PETAF Sbjct: 472 LEEILVDCSGDDNEEKNPETAF 493 >gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryza sativa Japonica Group] Length = 758 Score = 60.5 bits (145), Expect(2) = 8e-12 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = +3 Query: 3 DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92 DIYNK+VETFPDCE+IMGPG+HR SSRLEE Sbjct: 533 DIYNKVVETFPDCELIMGPGVHRTSSRLEE 562 Score = 34.3 bits (77), Expect(2) = 8e-12 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +2 Query: 173 KVLVDCSGDVEGEKSPETAF 232 ++LVDCSGD EK+PETAF Sbjct: 583 RILVDCSGDDNEEKNPETAF 602 >ref|NP_001048702.1| Os03g0108600 [Oryza sativa Japonica Group] gi|113547173|dbj|BAF10616.1| Os03g0108600, partial [Oryza sativa Japonica Group] Length = 653 Score = 60.5 bits (145), Expect(2) = 8e-12 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = +3 Query: 3 DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92 DIYNK+VETFPDCE+IMGPG+HR SSRLEE Sbjct: 449 DIYNKVVETFPDCELIMGPGVHRTSSRLEE 478 Score = 34.3 bits (77), Expect(2) = 8e-12 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 167 VRKVLVDCSGDVEGEKSPETAF 232 + ++LVDCSGD EK+PETAF Sbjct: 476 LEEILVDCSGDDNEEKNPETAF 497