BLASTX nr result

ID: Dioscorea21_contig00029922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029922
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [S...    62   4e-12
ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea ma...    62   4e-12
gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase fami...    62   4e-12
gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryz...    60   8e-12
ref|NP_001048702.1| Os03g0108600 [Oryza sativa Japonica Group] g...    60   8e-12

>ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [Sorghum bicolor]
           gi|241922526|gb|EER95670.1| hypothetical protein
           SORBIDRAFT_01g050040 [Sorghum bicolor]
          Length = 656

 Score = 61.6 bits (148), Expect(2) = 4e-12
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92
           DIYNK+VETFPDCEVIMGPG+HR SSRLEE
Sbjct: 452 DIYNKVVETFPDCEVIMGPGVHRTSSRLEE 481



 Score = 34.3 bits (77), Expect(2) = 4e-12
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 167 VRKVLVDCSGDVEGEKSPETAF 232
           + ++LVDCSGD   EK+PETAF
Sbjct: 479 LEEILVDCSGDDNEEKNPETAF 500


>ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea mays]
           gi|219887353|gb|ACL54051.1| unknown [Zea mays]
           gi|413957213|gb|AFW89862.1| putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 655

 Score = 61.6 bits (148), Expect(2) = 4e-12
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92
           DIYNK+VETFPDCEVIMGPG+HR SSRLEE
Sbjct: 451 DIYNKVVETFPDCEVIMGPGVHRTSSRLEE 480



 Score = 34.3 bits (77), Expect(2) = 4e-12
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 167 VRKVLVDCSGDVEGEKSPETAF 232
           + ++LVDCSGD   EK+PETAF
Sbjct: 478 LEEILVDCSGDDNEEKNPETAF 499


>gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays]
          Length = 649

 Score = 61.6 bits (148), Expect(2) = 4e-12
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92
           DIYNK+VETFPDCEVIMGPG+HR SSRLEE
Sbjct: 445 DIYNKVVETFPDCEVIMGPGVHRTSSRLEE 474



 Score = 34.3 bits (77), Expect(2) = 4e-12
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 167 VRKVLVDCSGDVEGEKSPETAF 232
           + ++LVDCSGD   EK+PETAF
Sbjct: 472 LEEILVDCSGDDNEEKNPETAF 493


>gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryza sativa Japonica
           Group]
          Length = 758

 Score = 60.5 bits (145), Expect(2) = 8e-12
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92
           DIYNK+VETFPDCE+IMGPG+HR SSRLEE
Sbjct: 533 DIYNKVVETFPDCELIMGPGVHRTSSRLEE 562



 Score = 34.3 bits (77), Expect(2) = 8e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 173 KVLVDCSGDVEGEKSPETAF 232
           ++LVDCSGD   EK+PETAF
Sbjct: 583 RILVDCSGDDNEEKNPETAF 602


>ref|NP_001048702.1| Os03g0108600 [Oryza sativa Japonica Group]
           gi|113547173|dbj|BAF10616.1| Os03g0108600, partial
           [Oryza sativa Japonica Group]
          Length = 653

 Score = 60.5 bits (145), Expect(2) = 8e-12
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   DIYNKLVETFPDCEVIMGPGLHRMSSRLEE 92
           DIYNK+VETFPDCE+IMGPG+HR SSRLEE
Sbjct: 449 DIYNKVVETFPDCELIMGPGVHRTSSRLEE 478



 Score = 34.3 bits (77), Expect(2) = 8e-12
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 167 VRKVLVDCSGDVEGEKSPETAF 232
           + ++LVDCSGD   EK+PETAF
Sbjct: 476 LEEILVDCSGDDNEEKNPETAF 497


Top