BLASTX nr result

ID: Dioscorea21_contig00029879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029879
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525017.1| Xylem serine proteinase 1 precursor, putativ...    60   2e-07
ref|XP_003635515.1| PREDICTED: cucumisin-like, partial [Vitis vi...    55   5e-06
ref|XP_002308740.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002525017.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis]
           gi|223535679|gb|EEF37344.1| Xylem serine proteinase 1
           precursor, putative [Ricinus communis]
          Length = 766

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
 Frame = -2

Query: 214 NTFLTLLILV-VFSFLQTPCFAATKASRESSYVVYLGAHS-----PNTMDDEAVLVSHHQ 53
           N+ ++LL L  +FSFLQ P  AA K     SYVVYLG HS      +T+D   +  SH++
Sbjct: 5   NSIISLLFLFSLFSFLQCPTEAAKK-----SYVVYLGVHSHGSEPSSTLDINGITDSHYE 59

Query: 52  LLTSILKSKDKAKDAIF 2
           LL S +KSK+KA++AIF
Sbjct: 60  LLGSCIKSKEKAREAIF 76


>ref|XP_003635515.1| PREDICTED: cucumisin-like, partial [Vitis vinifera]
          Length = 347

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = -2

Query: 199 LLILVVFSFLQTPCFAATKASRESSYVVYLGAHSPNTMDDEA----VLVSHHQLLTSILK 32
           L++ ++FS LQTP  A +K     SYVVYLG+HS      EA    V   HHQ L S L 
Sbjct: 10  LVLFLLFSVLQTPTSAISK-----SYVVYLGSHSHGLQVSEADFDRVADCHHQFLASFLG 64

Query: 31  SKDKAKDAIF 2
           S +KA+DAIF
Sbjct: 65  SHEKARDAIF 74


>ref|XP_002308740.1| predicted protein [Populus trichocarpa] gi|222854716|gb|EEE92263.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
 Frame = -2

Query: 205 LTLLILVVFSFLQTPCFAATKASRESSYVVYLGAHSP----NTMDDEAVLVSHHQLLTSI 38
           + LL++++FS  Q+P FA  K     SYVVYLG+H+     + +D +AV  SH + L S 
Sbjct: 8   ILLLLIILFSLFQSPAFAIKK-----SYVVYLGSHAHGPQISKVDLDAVADSHQEFLASY 62

Query: 37  LKSKDKAKDAI 5
           L S++KA+DAI
Sbjct: 63  LGSREKARDAI 73


Top