BLASTX nr result

ID: Dioscorea21_contig00029868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029868
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
gb|AEN70981.1| pectate lyase [Gossypium davidsonii] gi|345104321...   140   8e-32
ref|XP_002515037.1| Pectate lyase precursor, putative [Ricinus c...   140   1e-31
gb|AFK44189.1| unknown [Medicago truncatula]                          140   1e-31
ref|XP_003608909.1| Pectate lyase [Medicago truncatula] gi|35550...   140   1e-31

>ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|222869211|gb|EEF06342.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/98 (67%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
 Frame = +3

Query: 12  LLFITSQWMITL--STPIQDPDSIVQELQRMMNNSTRRKLNHLSCNTGNPIDDCWRCDPQ 185
           LLF+ S     L  S+P+QDP+ +VQE+ R +N S RRKL +LSC TGNPIDDCWRCDP 
Sbjct: 8   LLFLLSLLTPALISSSPVQDPELVVQEVHRAINAS-RRKLGYLSCGTGNPIDDCWRCDPN 66

Query: 186 WDQNRQRLADCAIGFGKNAIGGKDGRIYTVTDPSDDDP 299
           W++NRQRLADCAIGFGKNAIGG+DG+IY VTD  +DDP
Sbjct: 67  WEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGNDDP 104


>gb|AEN70981.1| pectate lyase [Gossypium davidsonii] gi|345104321|gb|AEN70982.1|
           pectate lyase [Gossypium klotzschianum]
          Length = 411

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/99 (62%), Positives = 78/99 (78%)
 Frame = +3

Query: 3   IFHLLFITSQWMITLSTPIQDPDSIVQELQRMMNNSTRRKLNHLSCNTGNPIDDCWRCDP 182
           +F   F+    ++  S+P+QDP+ +VQ++QR +N S RR L +LSC TGNPIDDCWRCDP
Sbjct: 15  LFLFTFLLLLPLLISSSPVQDPELVVQDVQRAINAS-RRNLGYLSCGTGNPIDDCWRCDP 73

Query: 183 QWDQNRQRLADCAIGFGKNAIGGKDGRIYTVTDPSDDDP 299
            W+ NRQ+LADCAIGFGKNAIGG+DG+IY VTD  DDDP
Sbjct: 74  NWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDP 112


>ref|XP_002515037.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223546088|gb|EEF47591.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 404

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/99 (64%), Positives = 79/99 (79%)
 Frame = +3

Query: 3   IFHLLFITSQWMITLSTPIQDPDSIVQELQRMMNNSTRRKLNHLSCNTGNPIDDCWRCDP 182
           IF LL +     I  S+P+QDP+ +V+E+ R +N S RRKL +LSC TGNPIDDCWRCDP
Sbjct: 9   IFFLLLVAPN-RIASSSPVQDPELVVEEVHRSINAS-RRKLGYLSCGTGNPIDDCWRCDP 66

Query: 183 QWDQNRQRLADCAIGFGKNAIGGKDGRIYTVTDPSDDDP 299
            W++NRQRLADCAIGFGK+AIGG+DG+IY VTD  +DDP
Sbjct: 67  NWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSGNDDP 105


>gb|AFK44189.1| unknown [Medicago truncatula]
          Length = 407

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   IFHLLFITSQWMITLSTPIQDPDSIVQELQRMMNNS-TRRKLNHLSCNTGNPIDDCWRCD 179
           +F LL + +  +I+ S+P+QDPD + QE+ R +N S  RR L +LSC +GNPIDDCWRCD
Sbjct: 9   LFFLLSLLTFSLIS-SSPLQDPDLVTQEVNRKINGSLARRNLGYLSCGSGNPIDDCWRCD 67

Query: 180 PQWDQNRQRLADCAIGFGKNAIGGKDGRIYTVTDPSDDDP 299
           P W++NRQRLADCAIGFGKNAIGGK+G+IY VTD  DDDP
Sbjct: 68  PNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSGDDDP 107


>ref|XP_003608909.1| Pectate lyase [Medicago truncatula] gi|355509964|gb|AES91106.1|
           Pectate lyase [Medicago truncatula]
          Length = 407

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   IFHLLFITSQWMITLSTPIQDPDSIVQELQRMMNNS-TRRKLNHLSCNTGNPIDDCWRCD 179
           +F LL + +  +I+ S+P+QDPD + QE+ R +N S  RR L +LSC +GNPIDDCWRCD
Sbjct: 9   LFFLLSLLTFSLIS-SSPLQDPDLVTQEVNRKINGSLARRNLGYLSCGSGNPIDDCWRCD 67

Query: 180 PQWDQNRQRLADCAIGFGKNAIGGKDGRIYTVTDPSDDDP 299
           P W++NRQRLADCAIGFGKNAIGGK+G+IY VTD  DDDP
Sbjct: 68  PNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSGDDDP 107


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