BLASTX nr result

ID: Dioscorea21_contig00029818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029818
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   172   8e-41
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              170   2e-40
ref|XP_002447716.1| hypothetical protein SORBIDRAFT_06g014360 [S...   164   2e-38
gb|ACG39972.1| DNA binding protein [Zea mays]                         163   3e-38
ref|NP_001150257.1| DNA binding protein [Zea mays] gi|194702940|...   163   3e-38

>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  172 bits (435), Expect = 8e-41
 Identities = 83/154 (53%), Positives = 117/154 (75%), Gaps = 2/154 (1%)
 Frame = -1

Query: 719 ITLPLRRPDSRCPEILDEKEFGKASESSVEDASKIRPAETLGLMERSNEARLLFFQLPSS 540
           +TLPLRRP S  PE+LDE+EFG+ASES+  D +   PA  LGLM+ + EA +LF QLP++
Sbjct: 131 VTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFLQLPAT 190

Query: 539 LPQEKKSASP--KDGSGRILQDLPSGLMGKILVYRSGIVKMKLGDVLLDVSPGVDCIFPQ 366
           +P  K++A+   K+     L++LPSG MGK+LVY+SG +K+KLGD L DVSPG+DC+F Q
Sbjct: 191 MPMIKQAATAEVKENKTCRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQ 250

Query: 365 DVAAINMDEKHCCIVGEINKRAVLSLDMDYLLNA 264
           DV AIN ++K CC++GE+ KRAV++ D+D  L++
Sbjct: 251 DVVAINTEDKCCCVLGELKKRAVVTPDVDSALSS 284


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  170 bits (431), Expect = 2e-40
 Identities = 82/152 (53%), Positives = 116/152 (76%)
 Frame = -1

Query: 719 ITLPLRRPDSRCPEILDEKEFGKASESSVEDASKIRPAETLGLMERSNEARLLFFQLPSS 540
           +TLPLRRP S  PE+LDE+EFG+ASES+  D +   PA  LGLM+ + EA +LF QLP++
Sbjct: 141 VTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFLQLPAT 200

Query: 539 LPQEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKMKLGDVLLDVSPGVDCIFPQDV 360
           +P  K++A+ +      L++LPSG MGK+LVY+SG +K+KLGD L DVSPG+DC+F QDV
Sbjct: 201 MPMIKQAATAETCR---LEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDV 257

Query: 359 AAINMDEKHCCIVGEINKRAVLSLDMDYLLNA 264
            AIN ++K CC++GE+ KRAV++ D+D  L++
Sbjct: 258 VAINTEDKCCCVLGELKKRAVVTPDVDSALSS 289


>ref|XP_002447716.1| hypothetical protein SORBIDRAFT_06g014360 [Sorghum bicolor]
           gi|241938899|gb|EES12044.1| hypothetical protein
           SORBIDRAFT_06g014360 [Sorghum bicolor]
          Length = 299

 Score =  164 bits (414), Expect = 2e-38
 Identities = 88/168 (52%), Positives = 114/168 (67%), Gaps = 16/168 (9%)
 Frame = -1

Query: 719 ITLPLRRPDSRCPEILDEKEFGKASESSVEDASKIRPAETLGLMERSNEARLLFFQLPSS 540
           +TLPLRRP S  PEILDEKEFG++S S  EDA ++  AE LGLM+   E++ L+FQ PSS
Sbjct: 129 VTLPLRRPYSGNPEILDEKEFGESSTSRSEDA-QLSAAEELGLMDWPAESQFLYFQFPSS 187

Query: 539 LP----------------QEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKMKLGDV 408
           LP                + ++   P    G  L+++P G MG+ILVYRSG VKMK+GD 
Sbjct: 188 LPLPRQPQSVANPNVVSNERREDMRPSSHIGSRLKEIPEGYMGRILVYRSGKVKMKIGDA 247

Query: 407 LLDVSPGVDCIFPQDVAAINMDEKHCCIVGEINKRAVLSLDMDYLLNA 264
           L DVS G +C+F Q+VAAIN  EKHCC VGEI+KRAV++ D+DY+L +
Sbjct: 248 LFDVSSGSNCMFVQEVAAINTREKHCCTVGEISKRAVIAPDIDYMLGS 295


>gb|ACG39972.1| DNA binding protein [Zea mays]
          Length = 300

 Score =  163 bits (413), Expect = 3e-38
 Identities = 84/168 (50%), Positives = 119/168 (70%), Gaps = 16/168 (9%)
 Frame = -1

Query: 719 ITLPLRRPDSRCPEILDEKEFGKASESSVEDASKIRPAETLGLMERSNEARLLFFQLPSS 540
           +TLPLR+P S  PEILDE+EFG++S S  +D  ++  AE LGLM+ S+E++ LFFQLPSS
Sbjct: 128 VTLPLRKPYSGNPEILDEEEFGESSASRTQD-DELSAAEQLGLMDMSSESQFLFFQLPSS 186

Query: 539 LP----------------QEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKMKLGDV 408
           LP                ++++   P   +G  L+++P G MGK+LVY+SG VKMK+GD 
Sbjct: 187 LPLPRQPQSVADPNEVRDEKREGMRPSSHNGSKLKEVPEGYMGKMLVYKSGKVKMKIGDT 246

Query: 407 LLDVSPGVDCIFPQDVAAINMDEKHCCIVGEINKRAVLSLDMDYLLNA 264
           L DVS G +C+F Q+VAAIN+ EKHCC VGEI+KRA+++ D++Y+L +
Sbjct: 247 LFDVSFGSNCMFSQEVAAINIREKHCCTVGEISKRAIITPDINYMLGS 294


>ref|NP_001150257.1| DNA binding protein [Zea mays] gi|194702940|gb|ACF85554.1| unknown
           [Zea mays] gi|195637872|gb|ACG38404.1| DNA binding
           protein [Zea mays] gi|414587522|tpg|DAA38093.1| TPA: DNA
           binding protein [Zea mays]
          Length = 300

 Score =  163 bits (413), Expect = 3e-38
 Identities = 84/168 (50%), Positives = 119/168 (70%), Gaps = 16/168 (9%)
 Frame = -1

Query: 719 ITLPLRRPDSRCPEILDEKEFGKASESSVEDASKIRPAETLGLMERSNEARLLFFQLPSS 540
           +TLPLR+P S  PEILDE+EFG++S S  +D  ++  AE LGLM+ S+E++ LFFQLPSS
Sbjct: 128 VTLPLRKPYSGNPEILDEEEFGESSASRTQD-DELSAAEQLGLMDMSSESQFLFFQLPSS 186

Query: 539 LP----------------QEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKMKLGDV 408
           LP                ++++   P   +G  L+++P G MGK+LVY+SG VKMK+GD 
Sbjct: 187 LPLPRQPQSGADPNEVRDEKREDMRPSSHNGSKLKEVPEGYMGKMLVYKSGKVKMKIGDT 246

Query: 407 LLDVSPGVDCIFPQDVAAINMDEKHCCIVGEINKRAVLSLDMDYLLNA 264
           L DVS G +C+F Q+VAAIN+ EKHCC VGEI+KRA+++ D++Y+L +
Sbjct: 247 LFDVSFGSNCMFSQEVAAINIREKHCCTVGEISKRAIITPDINYMLGS 294


Top