BLASTX nr result

ID: Dioscorea21_contig00029805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029805
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
emb|CBI41122.3| unnamed protein product [Vitis vinifera]              152   2e-35
emb|CBI23560.3| unnamed protein product [Vitis vinifera]              152   2e-35
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              152   2e-35

>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = +2

Query: 2   IIPRMEHYACMVDLLGRAGHLEEAIDFISSMPVKADALVWRTLLSACRTHGHTEFGERAA 181
           I+PRMEHYACMVDLLGR+G L EA++FI+SMP+ ADALVWRTLL ACR HG+TE G  AA
Sbjct: 570 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 629

Query: 182 REILDQEPDDPSAYVLLSNLYAMGGQWGKVAMIRSGMKEKSLNK 313
             IL+QEPDDP+AY+LLSNL+A  GQW  V  IR  MKE++L K
Sbjct: 630 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 673


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = +2

Query: 2   IIPRMEHYACMVDLLGRAGHLEEAIDFISSMPVKADALVWRTLLSACRTHGHTEFGERAA 181
           I+PRMEHYACMVDLLGR+G L EA++FI+SMP+ ADALVWRTLL ACR HG+TE G  AA
Sbjct: 390 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 449

Query: 182 REILDQEPDDPSAYVLLSNLYAMGGQWGKVAMIRSGMKEKSLNK 313
             IL+QEPDDP+AY+LLSNL+A  GQW  V  IR  MKE++L K
Sbjct: 450 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 493


>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = +2

Query: 2   IIPRMEHYACMVDLLGRAGHLEEAIDFISSMPVKADALVWRTLLSACRTHGHTEFGERAA 181
           I+PRMEHYACMVDLLGR+G L EA++FI+SMP+ ADALVWRTLL ACR HG+TE G  AA
Sbjct: 395 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 454

Query: 182 REILDQEPDDPSAYVLLSNLYAMGGQWGKVAMIRSGMKEKSLNK 313
             IL+QEPDDP+AY+LLSNL+A  GQW  V  IR  MKE++L K
Sbjct: 455 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 498


>emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = +2

Query: 2   IIPRMEHYACMVDLLGRAGHLEEAIDFISSMPVKADALVWRTLLSACRTHGHTEFGERAA 181
           I+PRMEHYACMVDLLGR+G L EA++FI+SMP+ ADALVWRTLL ACR HG+TE G  AA
Sbjct: 258 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 317

Query: 182 REILDQEPDDPSAYVLLSNLYAMGGQWGKVAMIRSGMKEKSLNK 313
             IL+QEPDDP+AY+LLSNL+A  GQW  V  IR  MKE++L K
Sbjct: 318 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 361


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = +2

Query: 2   IIPRMEHYACMVDLLGRAGHLEEAIDFISSMPVKADALVWRTLLSACRTHGHTEFGERAA 181
           I+PRMEHYACMVDLLGR+G L EA++FI+SMP+ ADALVWRTLL ACR HG+TE G  AA
Sbjct: 588 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 647

Query: 182 REILDQEPDDPSAYVLLSNLYAMGGQWGKVAMIRSGMKEKSLNK 313
             IL+QEPDDP+AY+LLSNL+A  GQW  V  IR  MKE++L K
Sbjct: 648 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 691


Top