BLASTX nr result

ID: Dioscorea21_contig00029779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029779
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]   104   6e-21
ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm...   102   4e-20
ref|XP_003574562.1| PREDICTED: RING-H2 finger protein ATL13-like...    89   4e-16
ref|XP_003527522.1| PREDICTED: RING-H2 finger protein ATL52-like...    88   6e-16
ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [S...    88   6e-16

>emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
          Length = 209

 Score =  104 bits (260), Expect = 6e-21
 Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = -2

Query: 433 SIGLASAFIHSLPSVQFCGEIKGGNNHINTECSVCLSEFLEGEWLRLLPNCGHVFHATCI 254
           S GL S+ ++SLP  QF  +   G +H NT+C+VCL EF EGE+L+ LPNC HVFH  CI
Sbjct: 31  SRGLDSSTVYSLPIAQF--KKNEGPSHSNTDCAVCLGEFEEGEFLKHLPNCSHVFHIPCI 88

Query: 253 DTWFSSHSVCPVCRTSVLHGFNVCNS-SGPNLPLMHALPREDIMHQ 119
           DTWF SHS CP+CR+ V + F + N  SG    L+  L RED   +
Sbjct: 89  DTWFESHSNCPLCRSHV-YDFTMDNEFSGSMYTLLETLRREDFFQE 133


>ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis]
           gi|223529306|gb|EEF31275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -2

Query: 433 SIGLASAFIHSLPSVQFCGEIKGGNNHINTECSVCLSEFLEGEWLRLLPNCGHVFHATCI 254
           S GL S  +HSLP  QF  + +      N EC+VCL E+ EGEWL+ LPNC HVFH  CI
Sbjct: 61  SHGLESTIMHSLPITQFKNKKEEEPRVSNNECAVCLGEYEEGEWLKHLPNCAHVFHVACI 120

Query: 253 DTWFSSHSVCPVCRTSVLHGFNVCNSSGPNLPLMHALP-REDIMHQ 119
           DTWF +HS CP+CR+   H +++ +    ++ ++   P RED  H+
Sbjct: 121 DTWFQTHSNCPLCRS---HVYDLSHEYSMSINILLETPRREDFFHE 163


>ref|XP_003574562.1| PREDICTED: RING-H2 finger protein ATL13-like [Brachypodium
           distachyon]
          Length = 509

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/105 (43%), Positives = 58/105 (55%)
 Frame = -2

Query: 457 LSSLTNSESIGLASAFIHSLPSVQFCGEIKGGNNHINTECSVCLSEFLEGEWLRLLPNCG 278
           L  L +    G+   FI +LP V   G + GG      +C+VCL EF + + LRLLP C 
Sbjct: 118 LQQLFHLHDAGVDQTFIDALP-VFLYGAVVGGGTKEPFDCAVCLCEFADDDRLRLLPKCS 176

Query: 277 HVFHATCIDTWFSSHSVCPVCRTSVLHGFNVCNSSGPNLPLMHAL 143
           H FH  CIDTW  SHS CP+CR S+L  F+ C   G   PL+  L
Sbjct: 177 HAFHVECIDTWLLSHSTCPLCRRSLLADFSPC--GGGCSPLVFVL 219


>ref|XP_003527522.1| PREDICTED: RING-H2 finger protein ATL52-like [Glycine max]
          Length = 226

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/98 (45%), Positives = 57/98 (58%)
 Frame = -2

Query: 457 LSSLTNSESIGLASAFIHSLPSVQFCGEIKGGNNHINTECSVCLSEFLEGEWLRLLPNCG 278
           L+ +++S + GL  A I S   ++ C   KGG      +CSVCL EF E E LRLLP C 
Sbjct: 100 LARISSSANSGLDEALIKS---IRVCKYNKGGGLVEGHDCSVCLIEFQENENLRLLPKCN 156

Query: 277 HVFHATCIDTWFSSHSVCPVCRTSVLHGFNVCNSSGPN 164
           H FH  CIDTW  SH+ CP+CR+SV      C +  PN
Sbjct: 157 HAFHLPCIDTWLKSHATCPLCRSSV----TACPNPNPN 190


>ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [Sorghum bicolor]
           gi|241940786|gb|EES13931.1| hypothetical protein
           SORBIDRAFT_07g021910 [Sorghum bicolor]
          Length = 500

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/115 (41%), Positives = 62/115 (53%)
 Frame = -2

Query: 457 LSSLTNSESIGLASAFIHSLPSVQFCGEIKGGNNHINTECSVCLSEFLEGEWLRLLPNCG 278
           L  L +    G+  +FI +LP V   G + G       +C+VCL EF + + LRLLP C 
Sbjct: 116 LQQLFHLHDAGVDQSFIDALP-VFLYGAVVGAGGKDPFDCAVCLCEFADDDRLRLLPKCS 174

Query: 277 HVFHATCIDTWFSSHSVCPVCRTSVLHGFNVCNSSGPNLPLMHALPREDIMHQEG 113
           H FH  CIDTW  SHS CP+CR S+L  F+ C   G   PL+  L  E +   EG
Sbjct: 175 HAFHVDCIDTWLLSHSTCPLCRRSLLADFSPC--GGGCSPLVFVL--ESVSGSEG 225


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