BLASTX nr result

ID: Dioscorea21_contig00029753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029753
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu...    83   2e-14
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]    80   1e-13
ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226...    80   2e-13
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni...    80   2e-13
ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus c...    80   2e-13

>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
           communis] gi|223538407|gb|EEF40013.1| Upstream
           activation factor subunit UAF30, putative [Ricinus
           communis]
          Length = 322

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/48 (77%), Positives = 44/48 (91%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAHFVK 346
           W YIK+N LQDP+D+R II DEKLKELF+VDTF+GFTV+KLL+AHFVK
Sbjct: 274 WEYIKQNNLQDPSDKRRIICDEKLKELFDVDTFNGFTVTKLLSAHFVK 321


>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
          Length = 332

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAHFVK 346
           W YIK+N LQDP+D+R II DEKLKELF+VD+F+GFTV KLL+AHF+K
Sbjct: 282 WEYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVPKLLSAHFIK 329


>ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
           sativus]
          Length = 225

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/48 (70%), Positives = 43/48 (89%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAHFVK 346
           W+YIK+N LQDP+D+R II DE+LKELF+VD+F+GFTVSKLL  HF+K
Sbjct: 175 WDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIK 222



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAH 355
           WN+I+EN LQDP++RRNI+ DE LK LF V++ + F ++K L+ H
Sbjct: 40  WNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKH 84


>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
           sativus]
          Length = 332

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/48 (70%), Positives = 43/48 (89%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAHFVK 346
           W+YIK+N LQDP+D+R II DE+LKELF+VD+F+GFTVSKLL  HF+K
Sbjct: 282 WDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIK 329



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAH 355
           WN+I+EN LQDP++RRNI+ DE LK LF V++ + F ++K L+ H
Sbjct: 147 WNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKH 191


>ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223538877|gb|EEF40475.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 614

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/48 (70%), Positives = 43/48 (89%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAHFVK 346
           W YIK+N LQDP+D+R I+ D+KLKELF VD+F+GF+VSKLLTAHF+K
Sbjct: 564 WGYIKQNDLQDPSDKRRILCDDKLKELFEVDSFNGFSVSKLLTAHFIK 611



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = -1

Query: 489 WNYIKENKLQDPADRRNIISDEKLKELFNVDTFHGFTVSKLLTAH 355
           W YI+EN LQDP ++RNI+ DE L+ LF VD  + F ++K+L+ H
Sbjct: 445 WIYIRENNLQDPKNKRNILCDESLRTLFRVDCINMFQMNKVLSKH 489


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