BLASTX nr result

ID: Dioscorea21_contig00029752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029752
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]...   105   4e-21
ref|XP_002330186.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|NP_001055295.1| Os05g0357100 [Oryza sativa Japonica Group] g...    99   5e-19
ref|XP_003568631.1| PREDICTED: probable exonuclease mut-7 homolo...    97   1e-18
ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797...    97   2e-18

>ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 570

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   EIYDLELKDFGEAISGLE--HDCMLDIAKAHMEHYIFNFIKAESYMTAVTLLERFQIHLS 174
           E +D++L +   AI  L+  +D   D AK  +E YIF  ++++SYMTAVTLLE F I  S
Sbjct: 147 EAFDVKLTNIEAAIQRLKARNDNRFDTAKKFVEQYIFKLVESQSYMTAVTLLEHFSIRQS 206

Query: 175 SESLLVKMMQNNQFKAAEKWATFMGKPMLYLLVQTYLDMKM 297
            +S L+KMM N Q +AAEKWATFMGKPML LLVQ Y+D  M
Sbjct: 207 GQSFLLKMMDNKQSQAAEKWATFMGKPMLCLLVQEYVDRNM 247


>ref|XP_002330186.1| predicted protein [Populus trichocarpa] gi|222871642|gb|EEF08773.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   EIYDLELKDFGEAISGL--EHDCMLDIAKAHMEHYIFNFIKAESYMTAVTLLERFQIHLS 174
           E++D++L D  EA+  L  + D   D AK  +E YIF  I ++SYMTA +LLE F I  S
Sbjct: 150 EVFDVKLADVDEALCQLNVQDDYKPDTAKTLVEDYIFKLIDSQSYMTAASLLEHFSIRHS 209

Query: 175 SESLLVKMMQNNQFKAAEKWATFMGKPMLYLLVQTYLDMKM 297
            +S LVKMMQN Q +AAEKWATFMGK ML  LVQ Y D  M
Sbjct: 210 GQSFLVKMMQNKQSRAAEKWATFMGKSMLCALVQEYADQNM 250


>ref|NP_001055295.1| Os05g0357100 [Oryza sativa Japonica Group]
           gi|55168078|gb|AAV43946.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578846|dbj|BAF17209.1|
           Os05g0357100 [Oryza sativa Japonica Group]
           gi|215716995|dbj|BAG95358.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196622|gb|EEC79049.1| hypothetical protein
           OsI_19612 [Oryza sativa Indica Group]
           gi|222631262|gb|EEE63394.1| hypothetical protein
           OsJ_18206 [Oryza sativa Japonica Group]
          Length = 580

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/100 (49%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   EIYDLELKDFGEAISGLE-HDCMLDIAKAHMEHYIFNFIKAESYMTAVTLLERFQIHLSS 177
           E YD+EL+D  +A+ G E  D  L  AK H++ Y+   +++ESY+TAV L+ RF I    
Sbjct: 151 EAYDIELRDMADALYGSELGDEDLVKAKEHLKQYVQCLMESESYVTAVNLITRFSIQCYD 210

Query: 178 ESLLVKMMQNNQFKAAEKWATFMGKPMLYLLVQTYLDMKM 297
           ES L K+++NN  +AAEKWA FMG  M+ L++QTYLD+KM
Sbjct: 211 ESFLTKLIENNHLEAAEKWAVFMGNEMICLIIQTYLDIKM 250


>ref|XP_003568631.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
           distachyon]
          Length = 523

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/100 (47%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   EIYDLELKDFGEAISGLEHDCM-LDIAKAHMEHYIFNFIKAESYMTAVTLLERFQIHLSS 177
           E +D+ELKD   A+ G + D   ++  + H++ Y+  F+K+ESY+TAV L+ RF I    
Sbjct: 112 ETFDIELKDMAHALYGSKLDFGDVEKTREHLKQYVQCFMKSESYVTAVALITRFSIQCCD 171

Query: 178 ESLLVKMMQNNQFKAAEKWATFMGKPMLYLLVQTYLDMKM 297
           ES L+ +M +NQFK AE+WA FMGK M+ +L+Q YLD+KM
Sbjct: 172 ESFLITLMGSNQFKEAEEWAAFMGKEMIVVLIQKYLDIKM 211


>ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797818 [Glycine max]
          Length = 571

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   EIYDLELKDFGEAISGLE--HDCMLDIAKAHMEHYIFNFIKAESYMTAVTLLERFQIHLS 174
           EI+D++L +  +A+  ++  H+     A   +E YI   +K++ YMTAVTL+E+F IH  
Sbjct: 151 EIFDVKLTNVEKAMCQIKEKHELSYGTANEFVEQYIVELVKSQFYMTAVTLIEQFSIHQY 210

Query: 175 SESLLVKMMQNNQFKAAEKWATFMGKPMLYLLVQTYLDMKM 297
            +S L+ M+Q+NQFKAAEKWATFMGKPML  LV+ +++  M
Sbjct: 211 GQSFLLDMIQSNQFKAAEKWATFMGKPMLSTLVEEFIERNM 251


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