BLASTX nr result

ID: Dioscorea21_contig00029749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029749
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...   213   1e-53
ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...   213   1e-53
ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange f...   212   2e-53
ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002516026.1| conserved hypothetical protein [Ricinus comm...   207   7e-52

>ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Cucumis sativus]
          Length = 553

 Score =  213 bits (542), Expect = 1e-53
 Identities = 106/123 (86%), Positives = 115/123 (93%)
 Frame = -2

Query: 371 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWKLEPMSAERKARWRREVDWLLS 192
           AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQW+LEPMS ERKARWR+E+D LLS
Sbjct: 116 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLS 175

Query: 191 VTEHIVEFVASNQVGKDGTNMEIMVTQQRKDLHMNIPALRKLDAMLIEYLDNFKDQNEFW 12
           VT++IVEFV S Q  KDGTNMEIMVT+QR DLH+NIPALRKLDAMLI+ LDNFKDQNEF+
Sbjct: 176 VTDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHLNIPALRKLDAMLIDCLDNFKDQNEFY 235

Query: 11  YVS 3
           YVS
Sbjct: 236 YVS 238


>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score =  213 bits (542), Expect = 1e-53
 Identities = 106/123 (86%), Positives = 115/123 (93%)
 Frame = -2

Query: 371 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWKLEPMSAERKARWRREVDWLLS 192
           AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQW+LEPMS ERKARWR+E+D LLS
Sbjct: 239 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLS 298

Query: 191 VTEHIVEFVASNQVGKDGTNMEIMVTQQRKDLHMNIPALRKLDAMLIEYLDNFKDQNEFW 12
           VT++IVEFV S Q  KDGTNMEIMVT+QR DLH+NIPALRKLDAMLI+ LDNFKDQNEF+
Sbjct: 299 VTDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHLNIPALRKLDAMLIDCLDNFKDQNEFY 358

Query: 11  YVS 3
           YVS
Sbjct: 359 YVS 361


>ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus] gi|449516167|ref|XP_004165119.1| PREDICTED: rho
           guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 515

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/123 (86%), Positives = 115/123 (93%)
 Frame = -2

Query: 371 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWKLEPMSAERKARWRREVDWLLS 192
           AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQW+LEPMS ERKARWR+E+D LLS
Sbjct: 67  AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLS 126

Query: 191 VTEHIVEFVASNQVGKDGTNMEIMVTQQRKDLHMNIPALRKLDAMLIEYLDNFKDQNEFW 12
           VT++IVEFV S Q  KDGTNMEIMVT+QR DLHMNIPALRKLDAMLI+ LDNFKDQ+EF+
Sbjct: 127 VTDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHMNIPALRKLDAMLIDCLDNFKDQSEFY 186

Query: 11  YVS 3
           YVS
Sbjct: 187 YVS 189


>ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|222840723|gb|EEE78270.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  209 bits (531), Expect = 2e-52
 Identities = 104/123 (84%), Positives = 113/123 (91%)
 Frame = -2

Query: 371 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWKLEPMSAERKARWRREVDWLLS 192
           AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQ +LEPMS ERKARW RE+DWLLS
Sbjct: 14  AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMSPERKARWIREIDWLLS 73

Query: 191 VTEHIVEFVASNQVGKDGTNMEIMVTQQRKDLHMNIPALRKLDAMLIEYLDNFKDQNEFW 12
           VT+H+VE V S Q  KDG+NMEIMVT+QR DLHMNIPALRKLDAML++ LDNFKDQNEF+
Sbjct: 74  VTDHVVELVPSQQKSKDGSNMEIMVTRQRNDLHMNIPALRKLDAMLLDSLDNFKDQNEFY 133

Query: 11  YVS 3
           YVS
Sbjct: 134 YVS 136


>ref|XP_002516026.1| conserved hypothetical protein [Ricinus communis]
           gi|223544931|gb|EEF46446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 554

 Score =  207 bits (527), Expect = 7e-52
 Identities = 103/123 (83%), Positives = 113/123 (91%)
 Frame = -2

Query: 371 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWKLEPMSAERKARWRREVDWLLS 192
           AKLLLGEDMSGGGKGVSSALALSNA TNLAASVFGEQ +LEPM AERKARWR+E+DWLLS
Sbjct: 114 AKLLLGEDMSGGGKGVSSALALSNATTNLAASVFGEQQRLEPMPAERKARWRKEIDWLLS 173

Query: 191 VTEHIVEFVASNQVGKDGTNMEIMVTQQRKDLHMNIPALRKLDAMLIEYLDNFKDQNEFW 12
           V+++IVE V S Q  KDGTNMEIMVT+QR DLHMNIPALRKLDAMLI+ LDNFKDQNEF+
Sbjct: 174 VSDYIVELVPSQQKNKDGTNMEIMVTRQRTDLHMNIPALRKLDAMLIDCLDNFKDQNEFY 233

Query: 11  YVS 3
           Y+S
Sbjct: 234 YIS 236