BLASTX nr result

ID: Dioscorea21_contig00029743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029743
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI23411.1| pectin methylesterase [Coffea arabica]                  88   1e-15
emb|CAC01624.1| putative pectin methylesterase [Populus tremula ...    88   1e-15
gb|AFB77928.1| pectin methylesterase [Gossypium hirsutum]              88   1e-15
gb|AER38243.1| PME2 [Gossypium barbadense]                             88   1e-15
gb|AFQ23194.1| pectin methylesterase [Theobroma cacao]                 87   3e-15

>gb|AFI23411.1| pectin methylesterase [Coffea arabica]
          Length = 587

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 19/124 (15%)
 Frame = -3

Query: 422 VHLSLTSITNLISHH----------HHNLHPRELAALQDCHELLDSTLDELHQ------- 294
           + L L   T  + H+          HHNL  RE  AL DC E +D TLDELHQ       
Sbjct: 107 IELVLNHTTTTVEHNYFAVEHLIATHHNLTEREKTALHDCLETIDETLDELHQTVKDLEL 166

Query: 293 --ANXXXXXXXXXXXXXXTAAITNQDSCLDGFSHDGADRGIRRLIISGITHVRRMCCNAL 120
             +               +AA+TNQ++CLDGFSHD AD+ +R+ + +G  HV ++C NAL
Sbjct: 167 YPSKKSLKQHADDLKTLMSAAMTNQETCLDGFSHDDADKHVRQELSNGQVHVEKLCSNAL 226

Query: 119 SMIK 108
           +MIK
Sbjct: 227 AMIK 230


>emb|CAC01624.1| putative pectin methylesterase [Populus tremula x Populus
           tremuloides]
          Length = 579

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
 Frame = -3

Query: 368 LHPRELAALQDCHELLDSTLDELHQANXXXXXXXXXXXXXXTA---------AITNQDSC 216
           L  RE  AL DC E +D TLDELH+A                A         AITNQ++C
Sbjct: 124 LTKREKTALHDCLETIDETLDELHEAQVDISGYPNKKSLKEQADNLITLLSSAITNQETC 183

Query: 215 LDGFSHDGADRGIRRLIISGITHVRRMCCNALSMIK 108
           LDGFSHDGAD+ +R+ ++ G THV +MC NAL+MIK
Sbjct: 184 LDGFSHDGADKKVRKALLKGQTHVEKMCSNALAMIK 219


>gb|AFB77928.1| pectin methylesterase [Gossypium hirsutum]
          Length = 567

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/116 (44%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
 Frame = -3

Query: 425 AVHLSLTSITNLISHHHHNLHPRELAALQDCHELLDSTLDELHQA----------NXXXX 276
           AV  +  SI  LIS    +L  RE AAL DC EL+D TLDEL  A          N    
Sbjct: 93  AVQSNYLSIKKLISTQRKSLTEREKAALNDCLELVDETLDELFVAEHDLSDYPSFNKSIS 152

Query: 275 XXXXXXXXXXTAAITNQDSCLDGFSHDGADRGIRRLIISGITHVRRMCCNALSMIK 108
                     +AA+TNQ++CLDGFSHD AD+ +R+ ++ G  HV  MC NAL+MIK
Sbjct: 153 QHADDLKSLLSAAMTNQETCLDGFSHDKADKKVRQALLDGQMHVFHMCSNALAMIK 208


>gb|AER38243.1| PME2 [Gossypium barbadense]
          Length = 521

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/116 (44%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
 Frame = -3

Query: 425 AVHLSLTSITNLISHHHHNLHPRELAALQDCHELLDSTLDELHQA----------NXXXX 276
           AV  +  SI  LIS    +L  RE AAL DC EL+D TLDEL  A          N    
Sbjct: 93  AVQSNYLSIKKLISTQRKSLTEREKAALNDCLELVDETLDELFVAEHDLSDYPSFNKSIS 152

Query: 275 XXXXXXXXXXTAAITNQDSCLDGFSHDGADRGIRRLIISGITHVRRMCCNALSMIK 108
                     +AA+TNQ++CLDGFSHD AD+ +R+ ++ G  HV  MC NAL+MIK
Sbjct: 153 QHADDLKSLLSAAMTNQETCLDGFSHDKADKKVRQALLDGQMHVFHMCSNALAMIK 208


>gb|AFQ23194.1| pectin methylesterase [Theobroma cacao]
          Length = 582

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/123 (40%), Positives = 66/123 (53%), Gaps = 18/123 (14%)
 Frame = -3

Query: 422 VHLSLTSITNLISHHHHN---------LHPRELAALQDCHELLDSTLDELHQA------- 291
           + LSL   T  + H++           L  RE  AL DC E +D TLDELH+A       
Sbjct: 100 IELSLNITTTAVEHNYFKIKKLLAKKGLTEREKTALHDCLETIDETLDELHEAVEDLHEY 159

Query: 290 --NXXXXXXXXXXXXXXTAAITNQDSCLDGFSHDGADRGIRRLIISGITHVRRMCCNALS 117
                            +AA+TNQ++CLDGFSHD AD+ IR+++I G  +V RMC NAL+
Sbjct: 160 PNKKSLTQHADDLKTLMSAAMTNQETCLDGFSHDAADKKIRKVLIDGEKYVERMCSNALA 219

Query: 116 MIK 108
           MIK
Sbjct: 220 MIK 222


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