BLASTX nr result

ID: Dioscorea21_contig00029717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029717
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26521.1| unknown [Picea sitchensis]                             147   7e-34
gb|ADE76509.1| unknown [Picea sitchensis]                             145   4e-33
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]        139   3e-31
ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
emb|CBI16904.3| unnamed protein product [Vitis vinifera]              138   5e-31

>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/123 (54%), Positives = 88/123 (71%)
 Frame = -1

Query: 469 NALVWEMLLSACRVHGDIERGKRSMEKIMALDPSDSAAYVLLSNLYASFGYWDSVMEVRQ 290
           NA VW  LL ACRVHG+IE  +R++E+++ L P +   YVLLSN+YA+ G WD   +VR+
Sbjct: 166 NASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRK 225

Query: 289 LMRDNGVKKEPGKSWIQVHNQAHEFVAGDHSHPQTDEIYATLRELLKQMKAEGYIPGVEF 110
           +M+D  VKKEPG SWI+V N+ H F+ GD SHPQ +EIY TL  L  QMKA GYIP   F
Sbjct: 226 MMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNF 285

Query: 109 LIN 101
           +++
Sbjct: 286 VLH 288


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/123 (52%), Positives = 93/123 (75%)
 Frame = -1

Query: 469 NALVWEMLLSACRVHGDIERGKRSMEKIMALDPSDSAAYVLLSNLYASFGYWDSVMEVRQ 290
           +A VW  LL ACR++G+I+ GK + E +  L+P ++A YVLLSN+YA+ G WD V +VR+
Sbjct: 42  DANVWGALLGACRMYGNIDLGKHAAECLFQLEPHNAAKYVLLSNIYAAAGRWDDVAKVRK 101

Query: 289 LMRDNGVKKEPGKSWIQVHNQAHEFVAGDHSHPQTDEIYATLRELLKQMKAEGYIPGVEF 110
           +M+D GV+K+PG SWI+V N+ H F+  D SHPQT+EIY+TL EL +QM+A GY+P   F
Sbjct: 102 IMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNF 161

Query: 109 LIN 101
           +++
Sbjct: 162 VLH 164


>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  139 bits (349), Expect = 3e-31
 Identities = 57/123 (46%), Positives = 90/123 (73%)
 Frame = -1

Query: 469  NALVWEMLLSACRVHGDIERGKRSMEKIMALDPSDSAAYVLLSNLYASFGYWDSVMEVRQ 290
            ++++W  LL AC++H ++E G+R+ EK+ +++PS++  YV+LSN+Y+S G WD V +VR+
Sbjct: 717  DSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRK 776

Query: 289  LMRDNGVKKEPGKSWIQVHNQAHEFVAGDHSHPQTDEIYATLRELLKQMKAEGYIPGVEF 110
            LM++ GV K+PG SW+Q+ N+ H FV GD  H Q   IYATL EL   +KA GY+P  +F
Sbjct: 777  LMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDF 836

Query: 109  LIN 101
            +++
Sbjct: 837  VLH 839


>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like
            [Vitis vinifera]
          Length = 877

 Score =  138 bits (347), Expect = 5e-31
 Identities = 58/123 (47%), Positives = 91/123 (73%)
 Frame = -1

Query: 469  NALVWEMLLSACRVHGDIERGKRSMEKIMALDPSDSAAYVLLSNLYASFGYWDSVMEVRQ 290
            +A++W  LLS C++HG++E  +++   I+ L+P DSAAYVLLSN+YA+ G W+ V ++R+
Sbjct: 746  DAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRK 805

Query: 289  LMRDNGVKKEPGKSWIQVHNQAHEFVAGDHSHPQTDEIYATLRELLKQMKAEGYIPGVEF 110
            +MR NG+KKEPG SWI++ ++ H F+ GD +HP++ EIY  L  L  +MK  GY+P  +F
Sbjct: 806  MMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDF 865

Query: 109  LIN 101
            ++N
Sbjct: 866  ILN 868


>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  138 bits (347), Expect = 5e-31
 Identities = 58/123 (47%), Positives = 91/123 (73%)
 Frame = -1

Query: 469  NALVWEMLLSACRVHGDIERGKRSMEKIMALDPSDSAAYVLLSNLYASFGYWDSVMEVRQ 290
            +A++W  LLS C++HG++E  +++   I+ L+P DSAAYVLLSN+YA+ G W+ V ++R+
Sbjct: 699  DAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRK 758

Query: 289  LMRDNGVKKEPGKSWIQVHNQAHEFVAGDHSHPQTDEIYATLRELLKQMKAEGYIPGVEF 110
            +MR NG+KKEPG SWI++ ++ H F+ GD +HP++ EIY  L  L  +MK  GY+P  +F
Sbjct: 759  MMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDF 818

Query: 109  LIN 101
            ++N
Sbjct: 819  ILN 821


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