BLASTX nr result

ID: Dioscorea21_contig00029693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029693
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18517.3| unnamed protein product [Vitis vinifera]              163   8e-38
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...   129   1e-27
ref|XP_002530558.1| conserved hypothetical protein [Ricinus comm...   127   4e-27
emb|CAN77561.1| hypothetical protein VITISV_026449 [Vitis vinifera]   127   7e-27
ref|XP_002306006.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-24

>emb|CBI18517.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  163 bits (412), Expect = 8e-38
 Identities = 107/312 (34%), Positives = 162/312 (51%), Gaps = 3/312 (0%)
 Frame = -3

Query: 1129 SCREKGSLMLNCLVSNILSKQTAMNTMPHKDG-RNLQVECCLAAVXXXXXXXXXKILWFL 953
            SCR+   L+L+ ++   LS   + +T  HK+G  +LQ    LA++         + +W +
Sbjct: 383  SCRDDIVLILSHMIPEALSGDDS-DTELHKEGDASLQDTYLLASILKLISSSMLQAIWCI 441

Query: 952  KQNSCPGGKRTPTD-NHCSEYKFVTSVIHSFGKYNAHRYVKNILFNECDALTERHKEIEL 776
              +  PG  +T  D + C EY+++  +I +FG+YN H  +   L +  D  T RHK+ ++
Sbjct: 442  SHSGNPGCLKTFKDLSSCKEYEYILGIIANFGRYNIHLPISKFLSHVMDHST-RHKDSKM 500

Query: 775  LFEHLSSLALYSFTRRLTFLWNGCIFMMMTITNLFQFEKDKFVALSQLLGYTHENSKTQF 596
            +  H S +   S    + F+  GC   MM I NLF FE+    AL  LL    E+  +  
Sbjct: 501  MLLHFSGMLSISLAIGVDFVVKGCTLAMMIILNLFIFEEGNLDALRPLLVSKVESFSSGI 560

Query: 595  STPKSLQDKVLQSSSLHIASNLQALRKLYLRNKVNSSPCGDECMDIGQSRKGDEQDEDAD 416
            S+    +  V Q+SS  +AS  Q ++ LYL   +  S C     D  +   G+      +
Sbjct: 561  SSGNIQRVLVEQNSSQMVASKFQKVQTLYLSTDLLPSSCSGN-KDGQEEMSGNANASILN 619

Query: 415  NTS-VPGVEEHADEADVCNGRIFLDCLSGYQNSPSEWEGLVDFIECKPGKDYSNWLRSRK 239
            N   V G+EE  +E   CNG+IFL+CL      PS+ + L  FIECK GKDYSNWLR RK
Sbjct: 620  NMDCVVGIEEKTEET--CNGKIFLNCLLEGSKEPSDLDDLAGFIECKEGKDYSNWLRDRK 677

Query: 238  VFRKWQNGRIAV 203
             +RKW+  ++AV
Sbjct: 678  RYRKWKCAKMAV 689


>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  129 bits (325), Expect = 1e-27
 Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 3/292 (1%)
 Frame = -3

Query: 1129 SCREKGSLMLNCLVSNILSKQTAMNTMPHKDG-RNLQVECCLAAVXXXXXXXXXKILWFL 953
            SCR+   L+L+ ++   LS   + +T  HK+G  +LQ    LA++         + +W +
Sbjct: 460  SCRDDIVLILSHMIPEALSGDDS-DTELHKEGDASLQDTYLLASILKLISSSMLQAIWCI 518

Query: 952  KQNSCPGGKRTPTD-NHCSEYKFVTSVIHSFGKYNAHRYVKNILFNECDALTERHKEIEL 776
              +  PG  +T  D + C EY+++  +I +FG+YN H  +   L +  D  T RHK+ ++
Sbjct: 519  SHSGNPGCLKTFKDLSSCKEYEYILGIIANFGRYNIHLPISKFLSHVMDHST-RHKDSKM 577

Query: 775  LFEHLSSLALYSFTRRLTFLWNGCIFMMMTITNLFQFEKDKFVALSQLLGYTHENSKTQF 596
            +  H S +   S    + F+  GC   MM I NLF FE+    AL  LL    E+  +  
Sbjct: 578  MLLHFSGMLSISLAIGVDFVVKGCTLAMMIILNLFIFEEGNLDALRPLLVSKVESFSSGI 637

Query: 595  STPKSLQDKVLQSSSLHIASNLQALRKLYLRNKVNSSPCGDECMDIGQSRKGDEQDEDAD 416
            S+    +  V Q+SS  +AS  Q ++ LYL   +  S C     D  +   G+      +
Sbjct: 638  SSGNIQRVLVEQNSSQMVASKFQKVQTLYLSTDLLPSSCSGN-KDGQEEMSGNANASILN 696

Query: 415  NTS-VPGVEEHADEADVCNGRIFLDCLSGYQNSPSEWEGLVDFIECKPGKDY 263
            N   V G+EE  +E   CNG+IFL+CL      PS+ + L  FIECK G  Y
Sbjct: 697  NMDCVVGIEEKTEE--TCNGKIFLNCLLEGSKEPSDLDDLAGFIECKEGVLY 746


>ref|XP_002530558.1| conserved hypothetical protein [Ricinus communis]
            gi|223529896|gb|EEF31826.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 776

 Score =  127 bits (320), Expect = 4e-27
 Identities = 82/300 (27%), Positives = 152/300 (50%), Gaps = 7/300 (2%)
 Frame = -3

Query: 1105 MLNCLVSNILSKQTAMNTMPHKDGRNLQVECCLAAVXXXXXXXXXKILWFLKQNSCPGGK 926
            +LNC++    S  T  NT+  K   + Q    LA++         + + +++     G +
Sbjct: 467  ILNCIILGSSSDDTC-NTLFLKGETSFQDIYLLASILKLMSSSMLQAIQYMRFFGISGCQ 525

Query: 925  RTPTDNHCS-EYKFVTSVIHSFGKYNAHRYVKNILFNECDALTERHKEIELLFEHLSSLA 749
            ++ TD   S EY ++  ++  F +++ H  ++N L     + + RHK+ + +  HLS L 
Sbjct: 526  KSSTDFSSSKEYNYLVHILGCFQQFSIHLPIQNFLNEMMQSHSARHKDSKWMLLHLSGLL 585

Query: 748  LYSFTRRLTFLWNGCIFMMMTITNLFQFEKDKFVALSQLLGYTHENSKTQFSTPKSLQD- 572
              S+   + FL  GC+F MM + NLF  E+    AL  L G   ++  ++  +P ++++ 
Sbjct: 586  SLSYASGIDFLVKGCLFTMMMLLNLFIIEEGDLSALRSLRGSRSKSYSSK--SPDNVEEV 643

Query: 571  KVLQSSSLHIASNLQALRKLYLRNKVNSSPCGDECMDIGQSRKGDEQDEDADNTSV---- 404
             V++ S+  I+S  Q ++  YLR + +          +   RK D Q E ++ + V    
Sbjct: 644  MVVRKSTELISSKFQKIQDTYLRTRSHV---------VSDKRKQDNQAETSEYSCVLNGL 694

Query: 403  -PGVEEHADEADVCNGRIFLDCLSGYQNSPSEWEGLVDFIECKPGKDYSNWLRSRKVFRK 227
               V   ++  ++CNG +FL C+ G  +   +++ L DF+ CKPGKDYS+WL+ R+  R+
Sbjct: 695  DSAVTVASNTEEICNGEMFLKCILGKNSKEPDFDDLADFVACKPGKDYSDWLKGREKLRQ 754


>emb|CAN77561.1| hypothetical protein VITISV_026449 [Vitis vinifera]
          Length = 741

 Score =  127 bits (318), Expect = 7e-27
 Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
 Frame = -3

Query: 1129 SCREKGSLMLNCLVSNILSKQTAMNTMPHKDGRNLQVECCLAAVXXXXXXXXXKILWFLK 950
            SCR+   L+L+ ++   LS   +   +  +   +LQ    LA++         + +W + 
Sbjct: 458  SCRDDIVLILSHMIPEALSGDDSDTELRKEGDASLQDTYLLASILKLISSSMLQAIWCIS 517

Query: 949  QNSCPGGKRTPTD-NHCSEYKFVTSVIHSFGKYNAHRYVKNILFNECDALTERHKEIELL 773
             +  PG  +T  D + C EY+++  +I +FG+YN H  +   L +  D  T RHK+ +++
Sbjct: 518  HSGNPGCLKTFKDLSSCKEYEYILGIIANFGRYNIHLPISKXLSHVMDHST-RHKDSKMM 576

Query: 772  FEHLSSLALYSFTRRLTFLWNGCIFMMMTITNLFQFEKDKFVALSQLLGYTHENSKTQFS 593
              H S +   S    + F+  GC   MM I NLF FE+    AL  LL    E+  +  S
Sbjct: 577  LLHFSGMLSISLAIGVDFVVKGCTLAMMIILNLFIFEEGNLDALRPLLVSKVESFSSGIS 636

Query: 592  TPKSLQDKVLQSSSLHIASNLQALRKLYLRNKVNSSPCGDECMDIGQSRKGDEQDEDADN 413
            +    +  V Q+SS  +AS  Q ++ LYL   +  S C     D  +   G+      +N
Sbjct: 637  SGNIQRVLVEQNSSQMVASKFQKVQTLYLSTDLLPSSCSGN-KDGQEEMSGNANASILNN 695

Query: 412  TS-VPGVEEHADEADVCNGRIFLDCLSGYQNSPSEWEGLVDFIECKPG 272
               V G+EE  +E   CNG+IFL+CL      PS+ + L  FIECK G
Sbjct: 696  MDCVVGIEEKTEE--TCNGKIFLNCLLEGSKEPSDLDDLAGFIECKGG 741


>ref|XP_002306006.1| predicted protein [Populus trichocarpa] gi|222848970|gb|EEE86517.1|
            predicted protein [Populus trichocarpa]
          Length = 751

 Score =  117 bits (292), Expect = 7e-24
 Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 1/296 (0%)
 Frame = -3

Query: 1105 MLNCLVSNILSKQTAMNTMPHKDGRNLQVECCLAAVXXXXXXXXXKILWFLKQ-NSCPGG 929
            +L+C++    S       +  K+  + Q    LA++         + +W++K   S    
Sbjct: 441  ILSCIILRYPSNDIGDTLLYKKEETSSQDIYLLASILKLMSSSLLQAIWYVKHLRSSVCL 500

Query: 928  KRTPTDNHCSEYKFVTSVIHSFGKYNAHRYVKNILFNECDALTERHKEIELLFEHLSSLA 749
            K     + C  Y  +  ++  F  ++    ++  L     +   RHK+   +F H S L 
Sbjct: 501  KSLEDVSSCKGYDVIVDILGCFEHFSISLPIQKFLCETLQSHPARHKKSRWMFFHFSGLL 560

Query: 748  LYSFTRRLTFLWNGCIFMMMTITNLFQFEKDKFVALSQLLGYTHENSKTQFSTPKSLQDK 569
              S+   L FL   C+F +M + N+F  E+    A+  L G + E+  ++ S+ KS    
Sbjct: 561  SLSYASGLDFLVKDCLFALMVVLNMFIIEEGDLAAVDSLFGSSLESFSSK-SSDKSEGVM 619

Query: 568  VLQSSSLHIASNLQALRKLYLRNKVNSSPCGDECMDIGQSRKGDEQDEDADNTSVPGVEE 389
             +  SS  ++S +Q ++++YLR +  S+ C ++     Q+   +      +  SV  +E 
Sbjct: 620  AISKSSQIVSSKIQKIQEMYLRTR--STICSNDRKQHNQAGTSEYGSIMNELDSVASME- 676

Query: 388  HADEADVCNGRIFLDCLSGYQNSPSEWEGLVDFIECKPGKDYSNWLRSRKVFRKWQ 221
              D  + CNG IFL C+ G        + L DFIEC+ GK+YS WLR R+ FR W+
Sbjct: 677  --DAKETCNGEIFLKCVLGKYAKSKVIDDLSDFIECEHGKNYSGWLRDRQRFRIWK 730


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