BLASTX nr result
ID: Dioscorea21_contig00029678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00029678 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24015.3| unnamed protein product [Vitis vinifera] 92 4e-17 ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-17 emb|CBI27814.3| unnamed protein product [Vitis vinifera] 89 5e-16 ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16 ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containi... 87 1e-15 >emb|CBI24015.3| unnamed protein product [Vitis vinifera] Length = 569 Score = 92.0 bits (227), Expect = 4e-17 Identities = 37/74 (50%), Positives = 59/74 (79%) Frame = -1 Query: 398 ALLGACRVHRNTQLGEIIGMQLLELDPQNSTTFAMVSNIYAEAGKWRDAATLRLVARERG 219 AL+GACR+H NT+LGE IG +++EL+P NS + +++N+YA AG+W D A +R + +RG Sbjct: 371 ALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRG 430 Query: 218 LRKMPGYSLVESEN 177 ++K PG+S++ESE+ Sbjct: 431 VKKAPGFSMIESES 444 >ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vinifera] Length = 624 Score = 92.0 bits (227), Expect = 4e-17 Identities = 37/74 (50%), Positives = 59/74 (79%) Frame = -1 Query: 398 ALLGACRVHRNTQLGEIIGMQLLELDPQNSTTFAMVSNIYAEAGKWRDAATLRLVARERG 219 AL+GACR+H NT+LGE IG +++EL+P NS + +++N+YA AG+W D A +R + +RG Sbjct: 426 ALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRG 485 Query: 218 LRKMPGYSLVESEN 177 ++K PG+S++ESE+ Sbjct: 486 VKKAPGFSMIESES 499 >emb|CBI27814.3| unnamed protein product [Vitis vinifera] Length = 555 Score = 88.6 bits (218), Expect = 5e-16 Identities = 40/71 (56%), Positives = 54/71 (76%) Frame = -1 Query: 398 ALLGACRVHRNTQLGEIIGMQLLELDPQNSTTFAMVSNIYAEAGKWRDAATLRLVARERG 219 ALLG+CR+H N +L E++ +L LDPQ T + ++SNIYAEAG+W DAA LR + ER Sbjct: 462 ALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERE 521 Query: 218 LRKMPGYSLVE 186 L+K+PG+SLVE Sbjct: 522 LKKIPGHSLVE 532 >ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290 [Vitis vinifera] Length = 597 Score = 88.6 bits (218), Expect = 5e-16 Identities = 40/71 (56%), Positives = 54/71 (76%) Frame = -1 Query: 398 ALLGACRVHRNTQLGEIIGMQLLELDPQNSTTFAMVSNIYAEAGKWRDAATLRLVARERG 219 ALLG+CR+H N +L E++ +L LDPQ T + ++SNIYAEAG+W DAA LR + ER Sbjct: 504 ALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERE 563 Query: 218 LRKMPGYSLVE 186 L+K+PG+SLVE Sbjct: 564 LKKIPGHSLVE 574 >ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Glycine max] Length = 622 Score = 87.0 bits (214), Expect = 1e-15 Identities = 36/71 (50%), Positives = 54/71 (76%) Frame = -1 Query: 398 ALLGACRVHRNTQLGEIIGMQLLELDPQNSTTFAMVSNIYAEAGKWRDAATLRLVARERG 219 ALLGACR+H+N ++GE +G LLE+ P+ S + ++SNIYA A KW+D +R + +++G Sbjct: 423 ALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKG 482 Query: 218 LRKMPGYSLVE 186 +RK PGYSL+E Sbjct: 483 VRKPPGYSLIE 493