BLASTX nr result

ID: Dioscorea21_contig00029638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029638
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28328.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]    62   5e-08
ref|XP_002328258.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002274348.2| PREDICTED: uncharacterized protein LOC100243...    60   2e-07
ref|XP_002459083.1| hypothetical protein SORBIDRAFT_03g045540 [S...    60   2e-07

>emb|CBI28328.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 21/123 (17%)
 Frame = +2

Query: 5    AVSFAKRTLVRCKEFEETGISCFSEPALREILFSAPPHCSNVSHIAPDKG---------- 154
            A++F KRTL RC++FE+TG SCFSEPAL++I+FS  P C++ +  A   G          
Sbjct: 944  AMAFVKRTLARCRKFEDTGRSCFSEPALQDIIFSV-PSCNSDAKSADCVGSGTASNTYNE 1002

Query: 155  ------QALGSVGNGLSTKCQR-----GSLDLCQSSAQVKLLTGNTAHNLSRNSEDELLL 301
                  +ALGSV   +S+  +R      +L+   SS  V+ +T ++     R  + E+LL
Sbjct: 1003 ACNHQPEALGSVTGAVSSNLERQDSHSDNLER-DSSHVVQAITHSSGQVFLRAKKREMLL 1061

Query: 302  DAV 310
            D V
Sbjct: 1062 DNV 1064


>emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]
          Length = 1734

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 18/120 (15%)
 Frame = +2

Query: 5    AVSFAKRTLVRCKEFEETGISCFSEPALREILFSAPPHCSN--VSHIAPD------KGQA 160
            A++F KRTL RC++FEETG SCFSEPALR+++ +A P CSN   S I P+      + +A
Sbjct: 1449 ALAFMKRTLDRCRKFEETGKSCFSEPALRDVILAA-PLCSNDAESIIHPEGLKCQPEPRA 1507

Query: 161  LGSVGNGL------STKCQRGSLD----LCQSSAQVKLLTGNTAHNLSRNSEDELLLDAV 310
             GS  N        + K +RG LD    L  SS Q    +G     L+R  + E+LLD V
Sbjct: 1508 SGSFTNRAGRNDYNNDKIERGLLDTHETLNHSSDQDFAKSGPI---LNRGKKKEVLLDDV 1564


>ref|XP_002328258.1| predicted protein [Populus trichocarpa] gi|222837773|gb|EEE76138.1|
            predicted protein [Populus trichocarpa]
          Length = 1212

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
 Frame = +2

Query: 5    AVSFAKRTLVRCKEFEETGISCFSEPALREILFSAP-PHCSNVSHIAPDKGQALGSVGNG 181
            A++F+KR L RC++FE++G SCFSEP L+EI+FSAP P C+N         +++  VG+G
Sbjct: 938  ALAFSKRALARCRKFEDSGSSCFSEPVLQEIIFSAPAPSCNN-------DAKSVDCVGSG 990

Query: 182  -LSTKCQRGS---LDLCQSSAQVKLLTGNTAH--NLSRNSEDELLLDAV 310
              S  C   S    +   S A    +    +H  N  R  + E+L+D V
Sbjct: 991  TASNTCNEVSNIHAEARGSGAVSSTIERYDSHSDNFDRIKKREVLIDDV 1039


>ref|XP_002274348.2| PREDICTED: uncharacterized protein LOC100243326 [Vitis vinifera]
          Length = 1190

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/102 (38%), Positives = 56/102 (54%)
 Frame = +2

Query: 5    AVSFAKRTLVRCKEFEETGISCFSEPALREILFSAPPHCSNVSHIAPDKGQALGSVGNGL 184
            A++F KRTL RC++FE+TG SCFSEPAL++I+FS  P C++ +  A   G   G+  N  
Sbjct: 944  AMAFVKRTLARCRKFEDTGRSCFSEPALQDIIFSV-PSCNSDAKSADCVGS--GTASNTY 1000

Query: 185  STKCQRGSLDLCQSSAQVKLLTGNTAHNLSRNSEDELLLDAV 310
            +  C        Q  A      G+    +S   + E+LLD V
Sbjct: 1001 NEACNH------QPEA-----LGSVTGAVSSTKKREMLLDNV 1031


>ref|XP_002459083.1| hypothetical protein SORBIDRAFT_03g045540 [Sorghum bicolor]
            gi|241931058|gb|EES04203.1| hypothetical protein
            SORBIDRAFT_03g045540 [Sorghum bicolor]
          Length = 1217

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2    SAVSFAKRTLVRCKEFEETGISCFSEPALREILFSAPPHCSNVSHIAPDKGQALGSVGNG 181
            +A+SF KR LVRC+ +EE G SCF EP  +++  SA  H S+    + D   A+  V   
Sbjct: 957  AALSFVKRVLVRCQNYEEAGTSCFDEPTFKDMFLSATSHRSSPDAASQDNNTAVKPVHRA 1016

Query: 182  LSTKCQRGSLDLCQ-SSAQVKLLTGNTAHNLSRNSEDELLLDAV 310
             ++   RGS  L   S A+    T N         + ELLLD V
Sbjct: 1017 SASDASRGSSHLTDLSFAKEDPWTNNV-------KQRELLLDEV 1053


Top