BLASTX nr result

ID: Dioscorea21_contig00029628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029628
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Gly...   184   6e-45
ref|NP_001169561.1| uncharacterized protein LOC100383440 [Zea ma...   180   1e-43
ref|XP_002467761.1| hypothetical protein SORBIDRAFT_01g033580 [S...   178   5e-43
ref|XP_003557787.1| PREDICTED: F-box protein At1g78280-like [Bra...   177   1e-42
dbj|BAK05984.1| predicted protein [Hordeum vulgare subsp. vulgare]    176   2e-42

>ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Glycine max]
          Length = 970

 Score =  184 bits (468), Expect = 6e-45
 Identities = 87/141 (61%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
 Frame = +1

Query: 142 RDRRPEALGDFRVLPDEILCSITDLLSPSDLGRLSCVSSVMYALCNEEPLWMNLSLK-AG 318
           RDRR +ALGD RVLPDEILCSI + L+P D  R+SCVSSVMY LCNE+PLWM+L LK A 
Sbjct: 7   RDRRADALGDLRVLPDEILCSILERLTPRDAARVSCVSSVMYILCNEDPLWMSLCLKGAS 66

Query: 319 GVIKYKGSWKKTVLYQQNLCTEFEDFCSKPLHFDGFYSLFLHRRWYRRFTTLDAFESDSG 498
           G ++YKGSWKKT L+ +NL  +++++   PLHFDGF SLFL+RR YR  TTLDAF +D+G
Sbjct: 67  GFLQYKGSWKKTALHNENLLDKYKEYSQGPLHFDGFNSLFLYRRLYRCHTTLDAFYADTG 126

Query: 499 VIERKKDLTLEEFHSNYDMKK 561
            ++R KD+ L++F++ YD KK
Sbjct: 127 NVKRIKDIPLKDFYNEYDAKK 147


>ref|NP_001169561.1| uncharacterized protein LOC100383440 [Zea mays]
           gi|224030097|gb|ACN34124.1| unknown [Zea mays]
          Length = 953

 Score =  180 bits (457), Expect = 1e-43
 Identities = 84/144 (58%), Positives = 105/144 (72%)
 Frame = +1

Query: 127 MEPQWRDRRPEALGDFRVLPDEILCSITDLLSPSDLGRLSCVSSVMYALCNEEPLWMNLS 306
           ME    DRR  ALG   VLPDE+LC++ D+LSP+D+GRL+CVSSVMY LCNEEPLWM+  
Sbjct: 1   MEAAGNDRREAALGALSVLPDEVLCAVVDILSPADIGRLACVSSVMYILCNEEPLWMSKC 60

Query: 307 LKAGGVIKYKGSWKKTVLYQQNLCTEFEDFCSKPLHFDGFYSLFLHRRWYRRFTTLDAFE 486
           L  GG ++YK SWKKT L +  LC+E ++   KP  FDGF SL+L+RRWYR FTTL++F 
Sbjct: 61  LSIGGPLEYKVSWKKTALCRLGLCSENKEIWQKPRQFDGFNSLYLYRRWYRCFTTLNSFS 120

Query: 487 SDSGVIERKKDLTLEEFHSNYDMK 558
            D G +ERK D  L++F S YD K
Sbjct: 121 FDDGHVERKDDFLLDQFRSQYDGK 144


>ref|XP_002467761.1| hypothetical protein SORBIDRAFT_01g033580 [Sorghum bicolor]
           gi|241921615|gb|EER94759.1| hypothetical protein
           SORBIDRAFT_01g033580 [Sorghum bicolor]
          Length = 951

 Score =  178 bits (452), Expect = 5e-43
 Identities = 85/144 (59%), Positives = 101/144 (70%)
 Frame = +1

Query: 127 MEPQWRDRRPEALGDFRVLPDEILCSITDLLSPSDLGRLSCVSSVMYALCNEEPLWMNLS 306
           ME     RR  ALG   VLPDE+LC++ DLL P+D+GRL+CVSSVMY LCNEEPLWM   
Sbjct: 1   MEAAGNGRRDAALGALAVLPDEVLCAVVDLLPPADIGRLACVSSVMYILCNEEPLWMTKC 60

Query: 307 LKAGGVIKYKGSWKKTVLYQQNLCTEFEDFCSKPLHFDGFYSLFLHRRWYRRFTTLDAFE 486
           L  GG ++YKGSWKKT L +  LC+E  +   KP  FDGF SL L+RRWYR FTTL +F 
Sbjct: 61  LSIGGPLEYKGSWKKTTLCRLGLCSENMEILQKPRQFDGFNSLHLYRRWYRCFTTLSSFS 120

Query: 487 SDSGVIERKKDLTLEEFHSNYDMK 558
            D G +ERK DL L++F S YD K
Sbjct: 121 FDDGHVERKDDLLLDQFRSQYDGK 144


>ref|XP_003557787.1| PREDICTED: F-box protein At1g78280-like [Brachypodium distachyon]
          Length = 949

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/144 (56%), Positives = 105/144 (72%)
 Frame = +1

Query: 127 MEPQWRDRRPEALGDFRVLPDEILCSITDLLSPSDLGRLSCVSSVMYALCNEEPLWMNLS 306
           ME     RR  ALG   VLPDE+LC++ DLL P+D+GRL+CVSSVMY LCNEEPLWM+  
Sbjct: 1   MEAAGNGRRDAALGGLAVLPDELLCAVVDLLQPTDIGRLACVSSVMYILCNEEPLWMSKY 60

Query: 307 LKAGGVIKYKGSWKKTVLYQQNLCTEFEDFCSKPLHFDGFYSLFLHRRWYRRFTTLDAFE 486
           L  GG ++YKGSWKKT L + +LC+E  +   K  HFDGF SL+L+RRWYR FT+L ++ 
Sbjct: 61  LSVGGRLEYKGSWKKTTLSRLSLCSENNEIEQKARHFDGFNSLYLYRRWYRCFTSLSSYS 120

Query: 487 SDSGVIERKKDLTLEEFHSNYDMK 558
            D+G +ERK DL+L++F   YD K
Sbjct: 121 FDNGHVERKDDLSLDQFRPQYDGK 144


>dbj|BAK05984.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 948

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/137 (60%), Positives = 102/137 (74%)
 Frame = +1

Query: 148 RRPEALGDFRVLPDEILCSITDLLSPSDLGRLSCVSSVMYALCNEEPLWMNLSLKAGGVI 327
           RR  ALG   VLPDE+LC+I DLL P+D+GRL+CVSSVMY LCNEEPLWM+  L  GG +
Sbjct: 9   RRGAALGGLAVLPDELLCAIVDLLQPTDIGRLACVSSVMYILCNEEPLWMSKYLSVGGHL 68

Query: 328 KYKGSWKKTVLYQQNLCTEFEDFCSKPLHFDGFYSLFLHRRWYRRFTTLDAFESDSGVIE 507
           +YKGSWKKT L +  LC+E  +   K  HFDGF SL+L+RRWYR FTTL ++  D+G +E
Sbjct: 69  EYKGSWKKTTLSRLGLCSESCELEQKARHFDGFSSLYLYRRWYRCFTTLSSYSFDNGHVE 128

Query: 508 RKKDLTLEEFHSNYDMK 558
           RK DL+L+ F S YD K
Sbjct: 129 RKDDLSLDHFRSQYDGK 145


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