BLASTX nr result

ID: Dioscorea21_contig00029622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029622
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440775.1| hypothetical protein SORBIDRAFT_09g006400 [S...   104   7e-21
ref|XP_002457958.1| hypothetical protein SORBIDRAFT_03g023470 [S...   104   7e-21
ref|XP_002264996.1| PREDICTED: CTD small phosphatase-like protei...   100   2e-19
gb|AFW81624.1| hypothetical protein ZEAMMB73_313891 [Zea mays]        100   2e-19
ref|XP_002522273.1| Carboxy-terminal domain RNA polymerase II po...    99   4e-19

>ref|XP_002440775.1| hypothetical protein SORBIDRAFT_09g006400 [Sorghum bicolor]
           gi|241946060|gb|EES19205.1| hypothetical protein
           SORBIDRAFT_09g006400 [Sorghum bicolor]
          Length = 319

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -3

Query: 379 CREM-DGKFVKDLAGVGRALDQVVIVDDNPNAYALQPENAVPVSPFVDDLGDRELWRVME 203
           CR+  DG+ VKDLA  GRALD+ VIVDDNPNAYALQPENAVPV+PFVDD  D+EL RVM 
Sbjct: 235 CRDAGDGRLVKDLAATGRALDRAVIVDDNPNAYALQPENAVPVAPFVDDDNDQELQRVMA 294

Query: 202 FLDVGLHRCEDVRDAIAWY 146
           FLDV     ED R+AI +Y
Sbjct: 295 FLDVAA-GYEDTREAIRYY 312


>ref|XP_002457958.1| hypothetical protein SORBIDRAFT_03g023470 [Sorghum bicolor]
           gi|241929933|gb|EES03078.1| hypothetical protein
           SORBIDRAFT_03g023470 [Sorghum bicolor]
          Length = 252

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -3

Query: 379 CREMD-GKFVKDLAGVGRALDQVVIVDDNPNAYALQPENAVPVSPFVDDLGDRELWRVME 203
           CR+ D G+ VKDLA  GRALD+ VIVDDNPNAYALQPENAVPV+PFVDD  D+EL RVM 
Sbjct: 168 CRDADDGRLVKDLAATGRALDRAVIVDDNPNAYALQPENAVPVAPFVDDDNDQELQRVMA 227

Query: 202 FLDVGLHRCEDVRDAIAWY 146
           FLDV     ED R+AI +Y
Sbjct: 228 FLDVAA-GYEDTREAIRYY 245


>ref|XP_002264996.1| PREDICTED: CTD small phosphatase-like protein-like [Vitis vinifera]
          Length = 285

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = -3

Query: 379 CREMDGKFVKDLAGVGRALDQVVIVDDNPNAYALQPENAVPVSPFVDDLGDRELWRVMEF 200
           C+E+DGKFVKDL+ +GR L +VVIVDDNPNAY LQPENA+P+ PF+DDL D EL  ++EF
Sbjct: 198 CKEIDGKFVKDLSDLGRDLKRVVIVDDNPNAYFLQPENAIPMPPFIDDLADGELENLIEF 257

Query: 199 LDVGLHRCEDVRDAIAWYLA 140
            + G    +D+RDA+  Y A
Sbjct: 258 FE-GCDSFKDMRDAVKHYQA 276


>gb|AFW81624.1| hypothetical protein ZEAMMB73_313891 [Zea mays]
          Length = 322

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/79 (67%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = -3

Query: 379 CREM-DGKFVKDLAGVGRALDQVVIVDDNPNAYALQPENAVPVSPFVDDLGDRELWRVME 203
           CR+  DG  VKDLA  GRALD+ VI+DDNPNAYALQPENAVPV+PFVDD  D+EL R+  
Sbjct: 238 CRDAGDGTLVKDLAATGRALDRAVIIDDNPNAYALQPENAVPVAPFVDDDNDQELQRMTA 297

Query: 202 FLDVGLHRCEDVRDAIAWY 146
           FLDV     ED RDAI  Y
Sbjct: 298 FLDVAA-GYEDTRDAIRCY 315


>ref|XP_002522273.1| Carboxy-terminal domain RNA polymerase II polypeptide A small
           phosphatase, putative [Ricinus communis]
           gi|223538526|gb|EEF40131.1| Carboxy-terminal domain RNA
           polymerase II polypeptide A small phosphatase, putative
           [Ricinus communis]
          Length = 300

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/89 (51%), Positives = 65/89 (73%)
 Frame = -3

Query: 379 CREMDGKFVKDLAGVGRALDQVVIVDDNPNAYALQPENAVPVSPFVDDLGDRELWRVMEF 200
           CRE+DGKFVKDL+ +GR L +VVIVDDNPN Y  QP+NA+P+ PF+DDL D EL ++ +F
Sbjct: 210 CREVDGKFVKDLSEMGRDLKRVVIVDDNPNCYTFQPDNAIPIKPFIDDLRDGELGKLAKF 269

Query: 199 LDVGLHRCEDVRDAIAWYLAGDTPEVKVS 113
            + G    ED+R+A+  ++ G+    KV+
Sbjct: 270 FN-GCDGVEDMRNAVKQFVCGEGDNKKVN 297


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