BLASTX nr result

ID: Dioscorea21_contig00029620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029620
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indi...   229   3e-58
tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea m...   226   2e-57
ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containi...   221   9e-56
dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]    220   2e-55
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   192   6e-47

>gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
          Length = 563

 Score =  229 bits (584), Expect = 3e-58
 Identities = 110/173 (63%), Positives = 133/173 (76%)
 Frame = -2

Query: 641 NDHAGYVLLSNIYAKGNDFNGVHEVRKMMMDRGVKKVPGCSSVEVGGEVHEFIAGDGSHS 462
           NDHAGYVLLSNIYA   ++ GVH+VRK+M+DRGV+KVPG SS+E+ G +HEFI+GD SHS
Sbjct: 391 NDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGDKSHS 450

Query: 461 RKEEIYVMLVEMAERLKLAGYKPDMEQVLLDIDEDXXXXXXXXXXXXXXAIAFSLVSTEA 282
            KE+IY ML EM ++LK+AGY PD   VLLDID++              AIAF L+ST  
Sbjct: 451 SKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAP 510

Query: 281 STTIRIVKNLRVCGDCHAAIKLLSVIYDRDIIVRDSSRFHHFQKGSCSCGDYW 123
            T IRI KNLRVCGDCH A+KLLS IY R IIVRD++RFHHF++GSCSCGD+W
Sbjct: 511 GTPIRIAKNLRVCGDCHNAVKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563


>tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
          Length = 584

 Score =  226 bits (577), Expect = 2e-57
 Identities = 109/173 (63%), Positives = 131/173 (75%)
 Frame = -2

Query: 641 NDHAGYVLLSNIYAKGNDFNGVHEVRKMMMDRGVKKVPGCSSVEVGGEVHEFIAGDGSHS 462
           NDHAGYVLLSNIYA   ++ GVH+VRK+M+DRGV K PG SSVE+ G +HEFI+GD SHS
Sbjct: 412 NDHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHS 471

Query: 461 RKEEIYVMLVEMAERLKLAGYKPDMEQVLLDIDEDXXXXXXXXXXXXXXAIAFSLVSTEA 282
           RK +IY ML E+ ++LK +GY PD  QVLLDID++              AIAF L+ST  
Sbjct: 472 RKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAP 531

Query: 281 STTIRIVKNLRVCGDCHAAIKLLSVIYDRDIIVRDSSRFHHFQKGSCSCGDYW 123
            T IR+V NLR+CGDCH AIKL+S IY R IIVRD++RFHHF+KGSCSCGDYW
Sbjct: 532 GTPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRDANRFHHFRKGSCSCGDYW 584


>ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 547

 Score =  221 bits (563), Expect = 9e-56
 Identities = 108/173 (62%), Positives = 128/173 (73%)
 Frame = -2

Query: 641 NDHAGYVLLSNIYAKGNDFNGVHEVRKMMMDRGVKKVPGCSSVEVGGEVHEFIAGDGSHS 462
           NDH GYVLLSNIYA   ++ GVH VRK M D GV+KVPG SS+EV G +HEFI+GD SHS
Sbjct: 375 NDHTGYVLLSNIYALDGNWKGVHNVRKRMFDSGVQKVPGSSSIEVDGVIHEFISGDKSHS 434

Query: 461 RKEEIYVMLVEMAERLKLAGYKPDMEQVLLDIDEDXXXXXXXXXXXXXXAIAFSLVSTEA 282
           RK+++Y ML E+ ++LK+AGY PD  QVLLDID++              AIAF L+ST  
Sbjct: 435 RKKDVYEMLGEICQQLKIAGYAPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAP 494

Query: 281 STTIRIVKNLRVCGDCHAAIKLLSVIYDRDIIVRDSSRFHHFQKGSCSCGDYW 123
            T IR+VKNLRVCGDCH AIKLLS IY R IIVRD++RFH F +GSCSC DYW
Sbjct: 495 GTPIRVVKNLRVCGDCHNAIKLLSKIYGRSIIVRDANRFHCFSEGSCSCRDYW 547


>dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 582

 Score =  220 bits (561), Expect = 2e-55
 Identities = 106/173 (61%), Positives = 133/173 (76%)
 Frame = -2

Query: 641 NDHAGYVLLSNIYAKGNDFNGVHEVRKMMMDRGVKKVPGCSSVEVGGEVHEFIAGDGSHS 462
           NDHAGYVLLSNIYA   ++ GV++VRK+M++ GV+KVPG SS+E+ G +HEFI+GD SHS
Sbjct: 410 NDHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHS 469

Query: 461 RKEEIYVMLVEMAERLKLAGYKPDMEQVLLDIDEDXXXXXXXXXXXXXXAIAFSLVSTEA 282
           RK ++Y ML E+ ++LK+AGY PD  QVLLDID++              A+AF L+ST  
Sbjct: 470 RKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLISTAP 529

Query: 281 STTIRIVKNLRVCGDCHAAIKLLSVIYDRDIIVRDSSRFHHFQKGSCSCGDYW 123
            T IRIVKNLRVCGDCH AIKLLS IY R I+VRD++RFH F++GSCSCGDYW
Sbjct: 530 GTPIRIVKNLRVCGDCHNAIKLLSKIYGRCIMVRDANRFHRFREGSCSCGDYW 582


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  192 bits (487), Expect = 6e-47
 Identities = 97/173 (56%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
 Frame = -2

Query: 638 DHAG-YVLLSNIYAKGNDFNGVHEVRKMMMDRGVKKVPGCSSVEVGGEVHEFIAGDGSHS 462
           +H G YVLLSNIYA    ++ V E+R+MM +R V K PGCS +++G  +HEF+AGD SH 
Sbjct: 469 NHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHP 528

Query: 461 RKEEIYVMLVEMAERLKLAGYKPDMEQVLLDIDEDXXXXXXXXXXXXXXAIAFSLVSTEA 282
           + E IY  L EM++ LK AGYKPD  QVLLD+DE+              AIAF L+ T+ 
Sbjct: 529 QLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEE-EKETALCHHSEKLAIAFGLIKTDP 587

Query: 281 STTIRIVKNLRVCGDCHAAIKLLSVIYDRDIIVRDSSRFHHFQKGSCSCGDYW 123
            TTIRI KNLRVC DCH+A KL+S IY+R+IIVRD  RFHHF+ GSCSC D+W
Sbjct: 588 GTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640


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