BLASTX nr result

ID: Dioscorea21_contig00029619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029619
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611315.1| Matrix metalloproteinase-28 [Medicago trunca...   130   1e-28
ref|XP_002534615.1| Metalloendoproteinase 1 precursor, putative ...   129   3e-28
ref|XP_002274477.1| PREDICTED: metalloendoproteinase 1 [Vitis vi...   127   1e-27
emb|CAN66084.1| hypothetical protein VITISV_024635 [Vitis vinifera]   122   3e-26
ref|XP_003635607.1| PREDICTED: metalloendoproteinase 1-like, par...   122   4e-26

>ref|XP_003611315.1| Matrix metalloproteinase-28 [Medicago truncatula]
           gi|355512650|gb|AES94273.1| Matrix metalloproteinase-28
           [Medicago truncatula]
          Length = 358

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 6/122 (4%)
 Frame = -3

Query: 349 WHAFANLTGVKQGDELSGIANLKHYLNRFGYL--PGNAANFTDTFDNSLTTAISLYQSKL 176
           WH F+     + G  +SG+A LK Y NRFGYL  P   ANFTDTFD+S  +A+ LYQ  L
Sbjct: 45  WHDFSRFLHAEPGSHVSGMAELKKYFNRFGYLSPPLTTANFTDTFDSSFQSAVVLYQKNL 104

Query: 175 NLPISGHLDEPTLTNLMSPRCGVSDTTTTRR----KTFQYFPGEPRWSRSHPITLSYSLS 8
            LPI+G LD  T++ ++SPRCGVSDT  T R    + F YF G+PRW R  P+TL+Y+ S
Sbjct: 105 GLPITGKLDSNTISTIVSPRCGVSDTAATHRIHTTQHFAYFNGKPRWLRGSPMTLTYAFS 164

Query: 7   PH 2
           P+
Sbjct: 165 PY 166


>ref|XP_002534615.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
           gi|223524902|gb|EEF27766.1| Metalloendoproteinase 1
           precursor, putative [Ricinus communis]
          Length = 325

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
 Frame = -3

Query: 349 WHAFANLTGVKQGDELSGIANLKHYLNRFGYLPGNAANFTDTFDNSLTTAISLYQSKLNL 170
           WH F       QG E++G++ LK YLNRFGYLPGN  NFTD FD    +AI  YQ+ L L
Sbjct: 16  WHDFTRFLDAGQGSEVTGMSELKKYLNRFGYLPGNV-NFTDIFDLEFESAILAYQNNLGL 74

Query: 169 PISGHLDEPTLTNLMSPRCGVSDTTTTR---RKTFQYFPGEPRWSRSHPITLSYSLSP 5
           P++G LD  T++ +MSPRCGVSD TT      K + YF G+PRW++  PI L+YS SP
Sbjct: 75  PVTGKLDADTISTIMSPRCGVSDKTTDSLHVTKHYAYFYGKPRWTKGSPIALTYSFSP 132


>ref|XP_002274477.1| PREDICTED: metalloendoproteinase 1 [Vitis vinifera]
           gi|297734565|emb|CBI16616.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
 Frame = -3

Query: 376 PPPSLPQFP------------WHAFANLTGVKQGDELSGIANLKHYLNRFGYLPGNAANF 233
           PPP L   P            WH F    G ++G  +SG+A LK Y NRFGYL     N 
Sbjct: 24  PPPELAPSPATVVTVKNGSYTWHGFQRFLGARRGSRISGMAELKKYFNRFGYLGFQDGNV 83

Query: 232 TDTFDNSLTTAISLYQSKLNLPISGHLDEPTLTNLMSPRCGVSDTTTTRRKT--FQYFPG 59
           TD FD  L +A++ YQ+KL LP++G LD  TL+ +MSPRCG+ D          + YFPG
Sbjct: 84  TDVFDTRLESAVAAYQAKLGLPVTGRLDSETLSQMMSPRCGMRDAMQPMHAAMHYVYFPG 143

Query: 58  EPRWSRSHPITLSYSLSP 5
           +PRW+R  P+TL+Y+ SP
Sbjct: 144 KPRWARPIPMTLTYAFSP 161


>emb|CAN66084.1| hypothetical protein VITISV_024635 [Vitis vinifera]
          Length = 353

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
 Frame = -3

Query: 376 PPPSLPQFP------------WHAFANLTGVKQGDELSGIANLKHYLNRFGYLPGNAANF 233
           PPP L   P            WH F    G ++G  +SG+A LK Y NRFGYL     N 
Sbjct: 24  PPPELAPSPATVVTVKNGSYTWHGFQRFLGARRGSRISGMAELKKYFNRFGYLGFQDGNV 83

Query: 232 TDTFDNSLTTAISLYQSKLNLPISGHLDEPTLTNLMSPRCGVSDTTTTRRKT--FQYFPG 59
           TD FD  L +A++ YQ+KL L ++G  D  TL+ +MSPRCG+ D          + YFPG
Sbjct: 84  TDVFDTRLESAVAAYQAKLGLQVTGRFDSETLSQMMSPRCGMRDAMQPMHAAMHYVYFPG 143

Query: 58  EPRWSRSHPITLSYSLSP 5
           +PRW+R  P+TL+Y+ SP
Sbjct: 144 KPRWARPIPMTLTYAFSP 161


>ref|XP_003635607.1| PREDICTED: metalloendoproteinase 1-like, partial [Vitis vinifera]
          Length = 234

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 4/118 (3%)
 Frame = -3

Query: 349 WHAFANLTGVKQGDELSGIANLKHYLNRFGYLPGNAANFTDTFDNSLTTAISLYQSKLNL 170
           W  F       +G ++SG++ LK Y  RFGYLP    NFTD FD+   TA+ +YQ+KL L
Sbjct: 41  WRFFERFLDTGKGSQVSGMSELKKYFQRFGYLPVPNTNFTDVFDSRFETAVIMYQTKLGL 100

Query: 169 PISGHLDEPTLTNLMSPRCGVSDTT----TTRRKTFQYFPGEPRWSRSHPITLSYSLS 8
           P+SG LD  T+T ++SPRCGVSDTT        + F YF G+PRW+R  P+TL+YS S
Sbjct: 101 PVSGKLDSKTITAIVSPRCGVSDTTPLEDVHETRHFAYFYGKPRWARVPPMTLTYSFS 158


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